Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1574 ATGGTTTTGCAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTCTGTGCCCTTCATTCTCTCCTTTCATGTCTTCTTGATTGTCTCTTATTACTATCTATATATTTCTGGGTACTGTGGCAAACTACTTGTTATTGGATAACTGGTTCCATGTTTCTAGTGGCTATATTGGAGCTGAATGGGGCTGGTGATGATTTGTTTAAAAAGCTATTGAGGCTGTGTGCATGGCCATTAATGGATGTTCTTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCATATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCAGAAATCTCTCAAATACGATCTTCCGTCGAACAAGATATTTAAAGAACAAGATTTTTTTTCTCTCTATCAGAAGGTTAATAATTTTTATTAG 456 0.3684 MVLQIDEELLQEVVNMGFDRNQLVCALHSLLSCLLDCLLLLSIYFWVLWQTTCYWITGSMFLVAILELNGAGDDLFKKLLRLCAWPLMDVLCVQDRVFYFPQGHIELLPEPTEQDLRQMKNQKSLKYDLPSNKIFKEQDFFSLYQKVNNFY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1574 151 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 4 27 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1574 Amo-Chr10 53491108 53492129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1574 69 120 B3 DNA Binding Superfamily AT4G23980 52.830 1.88e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1574 K14486 - ahf:114925841 160.614