Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1572 ATGACACACTATAATCATGTTGATATCATTGTTTTCCAGGGTGATAAAAAGGATTCAGTGACAGCAAGTCAAACCCTGGATTTGACATCTGGTTTTGAAGTTGGCCCAACAACAAATGGTGCATGCGATGCGGTATCATGTCATAGTGCTCGGTCAGTGTTGACTATTGCCTTCCAGTTTCCTTTTGACAGTAATCTGCAGGATAATGTTGCTGTCATGGCATGCCAGTACATCCGTAGTGTGATTTCCTCAGTGCAGAGGGTTACCATGGCGATTTCTCCATCTGGTATAAACCCGACAGTTAGCTCAAAACTCTCTTCTGGTTCTCCAGAAGATCTTACACTAGCCAACTGGATCTGCTGCAAGTTGCTGAGATCTGATTCTCTCATTGGTGAGTCAGTGCTTAAACATTTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCAGTGCCAGCGTTCATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGTTATTTATAACTATCTTTGACGTGCATCATATTCATTACTTCACATACAAAAAAAAGATAATTGATATTCATTATTTTTTATGA 621 0.409 MTHYNHVDIIVFQGDKKDSVTASQTLDLTSGFEVGPTTNGACDAVSCHSARSVLTIAFQFPFDSNLQDNVAVMACQYIRSVISSVQRVTMAISPSGINPTVSSKLSSGSPEDLTLANWICCKLLRSDSLIGESVLKHLWHHQDAILCCSLKSVPAFIFANQAGLDMLETTLVALQDITWLFITIFDVHHIHYFTYKKKIIDIHYFL* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1572 206 Pfam MEKHLA domain 118 179 IPR013978 -
Amo10g1572 206 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 14 179 - -
Amo10g1572 206 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 179 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1572 Amo-Chr10 53416016 53418725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1572 14 186 Homeobox Transcription Factor Family AT5G60690 64.674 1.19e-63 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1572 K09338 - aip:107640931 320.087