Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1568 ATGAATCACTTACCACGATTTTTAGGCCGTAGGAATGATAATAAGAAGCAAGACGGAATGGGCGTGGATCCCAAGAAGGCCCGAATGTCAAAGCCCCGTCTCGAGCGCCGCAACGCCGCCAAGCACTTCGATTACGACGCCGGCTCATCGTCTTCGTCGTTCAATGACTACTCCACTTTCTCCTCTCACGGCAACGGCGTTTCGGTGCTCTACACGCGCTCGATGGAGTTCTACGATCACAAGAGCTTCAGAATCGAAGGCGTCGAGGGCGAGTTCGACCGGATTTGCCAGAGCCTCGGCCTCTCTGGCCCAGAGGACTTCGCAATTCCCGCGGCGGCTTGGGAGGCCATGAAGGTTCGGTCTTCTTCGGATATTCTTCCGAGGTTGAAGCTTCGCGACTTGGATGAAGTCAAGGAGAGTGAAGAAATTGGGATGAAGGAAGGTGAATTTGGGGATAGTTCCCAACCTAAGGCTCCTAATCCGGTTACGGTTTCTGATCAATGCGTTCAAGAGATTGCTTGCAGAAGTTGCTTCACTCTCGGTGGTTGCGTTGGCGGAGATGATGGAGTTGAAGTTGGGGATAATTGTGAGGATAGCGTTACGGTCTGGGCTTCTGATGAATCTGTAAAAGACGGCGGTGATCGCGGAAACTACAACAGTACTGTAACTGCTGATACTGGCTGCAGCAGTGGCAGTGGCAGTGGCGGAGGTATCAAGGGCTTTCGGCCCCCTATGCTGAAACCAGCGCCGGGGAGTAGGGTTTCGGTTGTGGACAACGCGTCCTTCACATGGGACCTGTTGAGGGATTTTGCTCCACAAGGTGAAGGGAAGGAGAATTTCGTGGAATTCAGTGATTCAGATGATGATCATCGAGGATTGCATGAGATTGTTGCGGAGCTTACTGGGTCATGTTCTTTCACAACTTCGAATGGAGATGATTCTTCTAGCACTACCACGGATCCTAGGTCCAATAATATATCTCCTAATGGAAGATTTAAGCGTATTATTACCCACTGGCAGAAGGGTGATCTTTTGGGTCGCGGTTCCTTTGGGTCTGTCTACGAAGGAATTGCAGGGGATGGGTTCTTCTTTGCTGTAAAAGAAGTTTCACTGCTTGATCAAGGGAATCAGGGAAAGCAAAGTGTCTATCAATTGGAACAGGAGATTGCACTTTTGAGTCAGTTTCAACATGAGAATATAGTTCAATACTATGGTACAGAAATGGATGACTCAAAGCTGTATATCTTTCTTGAGCTTGTAACCAAAGGTTCTCTTGCAAGCCTCTACCATAGGTATACCCTTCGAGATTCCCAAGTATCTGCATATACCAGACAGATTCTGCACGGCCTAAAGTATCTTCATGATAGAAATGTCATCCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCCGATTTTGGATTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAATGAAGGGAACAGCATTTTGGATGGCCCCAGAGGTTGTGAAAGGAAAAGCCCGAGGTTATGGGCTTCCAGCTGATATATGGAGTTTGGGGTGCACTGTGTTGGAGATGTTGACGGGGAAAATCCCATATTCTCACTTGGAATGCATGCAGGCACTGTTTAGAATTGGAAAAGGTGAACCACCTCCGGTACCTGATTCTCTTTCAAGAGATGCAAATGATTTCATCCTGCAGTGCCTAAAAGTGAATCCAGATGATCGTCCCACGGCTACTCAACTCTTAACACATTCATTTGTCCAACGGCCACTTTCTCAGTCATCTGGCTCTGCATCTCCTTTCATTCCTAGAAGACGGGTCTTCATGTTGCTGGAGTTGGTGTAG 1860 0.4763 MNHLPRFLGRRNDNKKQDGMGVDPKKARMSKPRLERRNAAKHFDYDAGSSSSSFNDYSTFSSHGNGVSVLYTRSMEFYDHKSFRIEGVEGEFDRICQSLGLSGPEDFAIPAAAWEAMKVRSSSDILPRLKLRDLDEVKESEEIGMKEGEFGDSSQPKAPNPVTVSDQCVQEIACRSCFTLGGCVGGDDGVEVGDNCEDSVTVWASDESVKDGGDRGNYNSTVTADTGCSSGSGSGGGIKGFRPPMLKPAPGSRVSVVDNASFTWDLLRDFAPQGEGKENFVEFSDSDDDHRGLHEIVAELTGSCSFTTSNGDDSSSTTTDPRSNNISPNGRFKRIITHWQKGDLLGRGSFGSVYEGIAGDGFFFAVKEVSLLDQGNQGKQSVYQLEQEIALLSQFQHENIVQYYGTEMDDSKLYIFLELVTKGSLASLYHRYTLRDSQVSAYTRQILHGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSMKGTAFWMAPEVVKGKARGYGLPADIWSLGCTVLEMLTGKIPYSHLECMQALFRIGKGEPPPVPDSLSRDANDFILQCLKVNPDDRPTATQLLTHSFVQRPLSQSSGSASPFIPRRRVFMLLELV* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1568 619 Gene3D Transferase(Phosphotransferase) domain 1 337 605 - -
Amo10g1568 619 SUPERFAMILY Protein kinase-like (PK-like) 316 600 IPR011009 -
Amo10g1568 619 SMART serkin_6 339 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1568 619 MobiDBLite consensus disorder prediction 304 329 - -
Amo10g1568 619 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 78 605 - -
Amo10g1568 619 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Amo10g1568 619 MobiDBLite consensus disorder prediction 1 38 - -
Amo10g1568 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Amo10g1568 619 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 78 605 - -
Amo10g1568 619 MobiDBLite consensus disorder prediction 142 162 - -
Amo10g1568 619 ProSiteProfiles Protein kinase domain profile. 339 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1568 619 Pfam Protein kinase domain 340 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1568 Amo-Chr10 52632736 52642126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1568 33 596 MAP Kinase Kinase Kinase AT4G08500 50.744 1.70e-173 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo10g1568 Pkinase 4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1568 K13414 - gmx:100819177 713.761