Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1554 ATGGCTTCTTCCATGGCTCTCCCCATCGATCAACAGCAACAACAACAACCTAGTGGTGAGAATGAGAAAAAGGTTATTGTGGCAGCAGCAGAAGGGAGGAACAATAGGCGTGCATTACAAGACATTGGTAATCTTGTGGCTAAGCAAGCAGAACAAAATGTGACAAAGCGCAACACAAGAAACTTCTATGCTAATGACCAAGCTGCAGCAGAGAAGAACAAGAAATCAAGCACTGAACTTGTGAATGGAGAAGCAGTGGTTCCAGCTAATAGGGTTGGTGTGAGGAACTTCAATGCTGCAACAAAGTTAGAAGCAGATAAGAAGCCACCAACAGAACATGAAGTCATTGTCATCAGCTCAGATGATGAATCCGAGGAAGAAAAGAAGAAGAAGCCACAAGCCGCTAAAGGAAGAAAGATAAGGGAAGGGGTAACCAGGAAAAATGCTAAGGCTTTCAGTTCAGTCCTCTCGGCTAGAAGCAAGGCTGCTGGACTCGCTTATATGCCAAAGAAAGTGGTGAACATTGATGCAACTGACATGGACAATGAATTGGCAGCAGTGGAGTACATTGATGACATATACAAGTTCTACAAACTCACTGAAGATGATGGTCGTGTGCATGATTATATGGGTTCACAGCCTGATATAAACGCCAAGATGAGATCAATCCTTGTGGACTGGTTGATAGAAGTGCATAGAAAATTTGAACTAATGCCAGAAACTCTCTATCTGACCCTCAACATTGTTGATCGGTTTCTGTCCATGAGGGTTGTTCCAAGAAGGGAGCTTCAGCTGGTTGGCATAAGTTCAATGCTGATTGCTTGCAAATATGAAGAAATCTGGGCTCCAGAGGTGAATGACTTTGTTGTCATATCAGACAATGCCTATATTAGAGAACAAGTTTTGGTCATGGAGAAAACAATCCTGGGAAAGCTTGAATGGTACCTAACGGTTCCCACACCCTATGTGTTCCTTGTTCGGTATATCAAGGCCTCCACTCCCTCTGATGATGAGATGGAGAATATGGTGTTCTTCTTTGCTGAACTTAGCATGTTGCACTATCCTACTATTATCTCCTATAGTTCTTCTGTGATTGCTGCTTCTGCTGTGTATGCTGCAAGATGTACCCTTAAAAGGGTTCCTTCTTGGACTGAAACTCTTGAACACTACACAGGCTACTCTGAGGAAAACATAAGAAATTGTGCCAAACACATGGTAAACTTTCATGTTGCTGCTCCAGAAAGCAAGCTTAGGGCAGTTTACAAGAAATTCAGCAGCATGGATCGCAGTGCTGTTGCTCTTCGTACCCCGGCAAAGAACTTGCTAGCACAATCTTGA 1338 0.4327 MASSMALPIDQQQQQQPSGENEKKVIVAAAEGRNNRRALQDIGNLVAKQAEQNVTKRNTRNFYANDQAAAEKNKKSSTELVNGEAVVPANRVGVRNFNAATKLEADKKPPTEHEVIVISSDDESEEEKKKKPQAAKGRKIREGVTRKNAKAFSSVLSARSKAAGLAYMPKKVVNIDATDMDNELAAVEYIDDIYKFYKLTEDDGRVHDYMGSQPDINAKMRSILVDWLIEVHRKFELMPETLYLTLNIVDRFLSMRVVPRRELQLVGISSMLIACKYEEIWAPEVNDFVVISDNAYIREQVLVMEKTILGKLEWYLTVPTPYVFLVRYIKASTPSDDEMENMVFFFAELSMLHYPTIISYSSSVIAASAVYAARCTLKRVPSWTETLEHYTGYSEENIRNCAKHMVNFHVAAPESKLRAVYKKFSSMDRSAVALRTPAKNLLAQS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1554 445 Gene3D - 192 433 - -
Amo10g1554 445 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
Amo10g1554 445 SMART Cyclin_C_2 319 438 IPR004367 -
Amo10g1554 445 MobiDBLite consensus disorder prediction 1 23 - -
Amo10g1554 445 CDD CYCLIN 220 309 IPR013763 -
Amo10g1554 445 SUPERFAMILY Cyclin-like 320 440 IPR036915 -
Amo10g1554 445 Pfam Cyclin, C-terminal domain 319 434 IPR004367 -
Amo10g1554 445 Gene3D - 206 317 - -
Amo10g1554 445 PANTHER CYCLIN-B1-4 28 440 - -
Amo10g1554 445 SMART cyclin_7 226 310 IPR013763 -
Amo10g1554 445 SMART cyclin_7 323 407 IPR013763 -
Amo10g1554 445 MobiDBLite consensus disorder prediction 1 21 - -
Amo10g1554 445 SUPERFAMILY Cyclin-like 181 316 IPR036915 -
Amo10g1554 445 CDD CYCLIN 317 406 IPR013763 -
Amo10g1554 445 PIRSF Cyclin_A_B_D_E 1 445 IPR039361 -
Amo10g1554 445 MobiDBLite consensus disorder prediction 106 142 - -
Amo10g1554 445 PANTHER CYCLINS 28 440 IPR039361 -
Amo10g1554 445 Pfam Cyclin, N-terminal domain 192 316 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1554 Amo-Chr10 52405211 52408002 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1554 10 434 Core Cell Cycle Gene Families AT2G26760 50.824 1.90e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1554 K21777 - gmx:547782 549.666