Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1502 TTGCTCGTTCTTCTTCTCGCGAAGCTTCCCCTGGTTTCTTCGATCGTTCTTTTCCCCTCCTTTCTCACTCGTTTCTTCTTCGTCATTTACGTTAGTTCCTCTCTCTGTAACTCCAGCTTCGTTTTCTATTTGATTTTTTGTTTTCTGAAATCAAAGTTTGAACTCGTTTTGAAGATAATGGATGATTCAACCTCAGATTGTCAGCTGAATCCTGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCTGTTGTTAATGACCAGTTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTTTCTACAAGAGTTTGGAGCACAAATAGGAAGGAAAACAAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACTAATCCAACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAATCTAAGGAGAACGAGATGCATGTCCATTCGTCGACAATAGAGAATAACGAGGAGGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGTTTATCACCCGGAATAGCTCGCTTATTCAGTTCGTCAAACAATACGATAATTGCCTCGGAAGCAGAGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTTATACGGTCATACCGTGTGCAACCAAATCCTCCATTGAAGCTCAGTTTCAAGATGTGTACACTCATCAAAAGTTTAGGGAAGTCCAAGCACAATTCAGAGGAAAGGCGAATTGCATCACCAGATTAACGAATTCCGCTCTAAGCTATTCAGTATACGAATTTGTGGTTACTTACGACTCAGTTGCAGCCGAGGTAAAATTTCAATGCTTATTATTCGAGTCGAGAGGGATACTGTGTCGTCACGCACTAAGCGTGTTAAGCTTTGAACAAGTAAGCCAAGTGTCACCTAGATATATACTGGAACGATGGAGTAAGAAGGTAAAGAGGCGACACACACATATCAAGAGCAGCCACGACGAGCCACTGATGGAGCCAAGAAGCAAGAGGTTTGACCAATTGGTTTTTCGTTCACAAAATATTTGCGAATTTGCATCCGAATCGGAGGAGCTGACTGTAATTCTGCACCGTACATACGATAACGTCATGGCTGAGATGGAATCATTAAAAGCCAAAAGGAAGGGGACATCTTCTTTATCCCACGAAGACGCCAACTTGGAATCCGTTAACGAGCTTCAAAGCCCGCCAAGGATTCGAACAAGAGGACGTCCAAAAAATAGGCTAGGTTCAAAGTTGGACAAACAGATTACAAATGCCACAAAGAAGAAGAAAATGAATGTTTTAAGCGAGATAAACTTGTTTGATACTGCATCAGTGGTGCATTCAAATTCCAGCCAATATCAAGGACATGTTATGAATTATCAGTTCAGGGTACCAACAGTAGGGGATAACTCTTTGGCTGTATAG 1620 0.4185 LLVLLLAKLPLVSSIVLFPSFLTRFFFVIYVSSSLCNSSFVFYLIFCFLKSKFELVLKIMDDSTSDCQLNPGEVDYEFESNEVPEPLSVVNDQFVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVWSTNRKENKIKNQLITCSREGKWKSKISPTEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKSKENEMHVHSSTIENNEEGMRSTQRSESMHSFFNKFITRNSSLIQFVKQYDNCLGSREQAERESDAADFYTVIPCATKSSIEAQFQDVYTHQKFREVQAQFRGKANCITRLTNSALSYSVYEFVVTYDSVAAEVKFQCLLFESRGILCRHALSVLSFEQVSQVSPRYILERWSKKVKRRHTHIKSSHDEPLMEPRSKRFDQLVFRSQNICEFASESEELTVILHRTYDNVMAEMESLKAKRKGTSSLSHEDANLESVNELQSPPRIRTRGRPKNRLGSKLDKQITNATKKKKMNVLSEINLFDTASVVHSNSSQYQGHVMNYQFRVPTVGDNSLAV* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1502 539 MobiDBLite consensus disorder prediction 444 481 - -
Amo10g1502 539 Pfam FAR1 DNA-binding domain 110 195 IPR004330 -
Amo10g1502 539 PANTHER OS03G0843700 PROTEIN 85 207 - -
Amo10g1502 539 PANTHER OS03G0843700 PROTEIN 224 436 - -
Amo10g1502 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 85 207 IPR031052 GO:0006355
Amo10g1502 539 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 224 436 IPR031052 GO:0006355
Amo10g1502 539 MobiDBLite consensus disorder prediction 452 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1502 Amo-Chr10 47551530 47554710 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g1502 FAR1 8.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1502 - - adu:110280503 543.502