Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1492 ATGGAAAATGGCGCCAAGGGATGCGAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAACGCGCTAAATCCATGAAGTTCAAGGACTACATTGATTCTGCTGTAAGACATGTACTCCTTAGGCAGGTCAGTATATACTCTTTTAGACAAGTCTTCCTTTGA 159 0.4465 MENGAKGCEVIVSGKLRAQRAKSMKFKDYIDSAVRHVLLRQVSIYSFRQVFL* 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1492 52 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 1 42 - -
Amo10g1492 52 SUPERFAMILY Ribosomal protein S3 C-terminal domain 1 39 IPR036419 -
Amo10g1492 52 Gene3D - 1 45 IPR036419 -
Amo10g1492 52 PANTHER BNAC06G00510D PROTEIN 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1492 Amo-Chr10 46443896 46444132 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1492 1 41 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 73.585 1.09e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1492 K02985 - sspl:121800015 74.7146