Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1435 ATGAAGCCAGACGAGACGGCATCAGCTTCTGGTTATGCGAGTTGGTCATGGACGGTGGTGTGCCTTTTCATATCAGGTATAGTTGTTGGTTCATTCATAGCAGGCATGTTACTCAATTGGAAACCCTTACTCAGCAGCAAGTTCTGGGCTCTACTTGGTTACCAAGATGAGGCGTTGGTTATCACCGAGGGAAGTTCGTCTTCCCCGCGGGGTTACAAATATGATGTGTTTCTGAGTTTCAGAGGTTCTGATACCCGCCGTAGTTTTGTTGATTATCTTTACCGACGTCTCTTGGAAGAAGGTATTTTGGCCTTCAAAGACGAGAAGGAATTAAACAGAGGAGAAATCATTTCATCAAAGCTCCTGCAAACAATTAAAGATTCACGGATTTCTATCGTTGTGTTCTCAAGGGGTTACGCTCGCTCAAAGTGGTGTTTGGACGAACTGGTTGCTATAGTTGATTGTCACAAAGAGATGAAGCAGGAACTTCTCCCAGTTTTCTATGATGTCGATCCACGTGACGTTCGATATCAAACTGGGCCATACGAGGATGCCTTTGACTCGCATAGGGAGAGATTCAGAGAAGAGCCTGACAAGATCTACAAATGGAAGAGTGCTATGACGTATTTGTCCAATATTAGTGGTTTGATTTTAAGAGATCAAGCAACAACTGAAGGGATTGACAAAATGATTGAGGCGGTGTTGGACAGACTGGTTTATAAATTCCAAAGTTCAAGGTTTGCTGATAAAAATCCAGAATCCCCTCAAGGAAGACCATCATCGCAGGAAGTCAACAAGTATGACGTGTTTCTCAGTCTCAGACGCGCCCACACTCCTCACACATTTATTGACCATCTTTACCAATATCTCAACAAGAGAGGATTTTCCACCTTCAGAAGTGACGAGGTGATGTCAGAGTCACAGCTCCGGCAAGCACTTAAAAATTCAAAGATTCTTATCATTGTCTTCACAAGTGATTATGCTGACTCAAGATTCTGTTTGGACGAAATGGCTACTATAGTTGATTGTCACCGGGAACTAAAACAAACTATCATCCCAGTTTTCTGTGGTGTGGATCCTAGTGATGTTCGAAGACAAGCGGGTCCATACCAGAAAGCCTTTATTTCGTATACAGAGGAATTCAAGCAAGATCCTCTCAAGGTTCAACAATGGAGGGAAGCTTTCAAGTATATCACTGATCTACGTGGTGTTGTTCTAAGAGATGGGCCAGAGACTGAAGCGATTGGAAATATCATTCAGACAGTGGAACAGTTATTCCCTAAATTCCCAAGGCCTAGTAGCCATAGTCAAGGTTGGATACAATCCCGTTTAGACGGGCTAGAGAAGCTTTTGAAATTAGAGGATGATTGTATTTTAGTGGTTGGAATTTGGGGCATGGGTGGATCTGGAAAGACAACCCATGCTTTAGCTTTGTATAACAGAATCTTTGAGAAATTTGAGGGTGCTTGTTTCATTCAGGACGTAAGCCAGGTTTACAGAGTTGGTGGTGCAACTGCTTTGCAGAAACAAATACTCTGTGAATCTTTAAATGTAGAACTTTCAGATATCTACAATCCTTTAGAAATATCTGACCTCTTAAGAAAGCTATATCGGAAAAAGATCCTTATAGTCCTTGATGGTGTTGATGAGCTACGCCAGTTGGACTTATTGGCTATAAATCGCAACATGCTTGGGAAGGGAAGTAGGATTATCATAACCACTAGGAATAGGCATATTTTGGATGCATATAAAGTAGATTTTATTCACGAGATTTCACTGTTGAATAATGATGAAGCTCGTGAACTGTTCCTGAGTGCTTGTGGTATTGTGGATGATCAGGACTATACTAGGTTGATTCCTAGAGTGCTAGAATATGCTCATGGTCTTCCGTTGGCAATCAAAGTACTGGGTTCTTTTTTGCAATACCGTGATGTAACCTTCTGGGAAGATACCTTGGATAGACTGAGAAGAGAGCCATCTTTTGAAATCATGAAGACTCTTCAAACAAGTTTTGATGGATTAGACGATGAAGACAGAGAAATCTTTTTGCACATTGCTTGTTTCTTTCATGGGAAGAAGGTAGATTTTGTAAAGGAAGTTCTAAGTTGTTGTGGATTTTTGGTTGAAATAGGGATTCAAACTTTGTTGGACAAATCACTCATCACTATCCAAAATGAGGAAATTCATATGCACGATCTGTTGCAAGATTTGGGAAAGAAAATTGTCCATGAAGAATATCCAAATAATCCAGGATTGCGGAGTAGATTGTGGCTTTACGAGGACTTTAGTTTTGTCTTGAAGTCAAACACGGCAACAAGCAAGGTTAAAGATATAGTTCTATATGAGGATGCCTCCATCTCTGAATATGAAGATTTGAACATTGAAGGATTGTCAAAAATTAGAAATCTTGAACTGCTCATATTATATGATCTGCATTTTTCAGGAAGACTTACTTCTCTTCCCAATGAATTACGGTATCTTTTTTGGCATGGATATCCTTTCTATTCTTTGCCTTCATTAGAACCGTATAATCGTCTTGTTGGATTGAATTTGCCTAACAGCAACATCGAACGCCCATGGTATGGCTGCAAGGACTTCCCACATTTGGAAAGGGTGGATTTGAGTTACTCAAAATACCTCAGGGAGACACCAAATTTTGAAGGGAGCCCAAGACTTAAGCGTCTAGATTTCACAGGATGCAGAGAGCTAATGGAAGTCCATCCATCTATCGGACATCTTAAAGAACTTGCTTACTTGAGTTTCCGTGACTGTGATATGTTGGTCACCCTCAATCTTGATCATAAATGCAAATTAAGTTCTTTGAAGGTTCTTGACCTCTATAGTTGCAGACATCTTGAGAACACACCAGATTTTACAGGACTACCCAATGTTGAGCACATTGATCTTGGAAAATGTGAAAGTTTATCCACTGTTCATCATTCTATTGGGAATCTTGAAAAGCTTAAGTTCTTAAATGTGCCAGCCGACATAGATCTTCCTAAGTTAGGTGGTGTCAGAATTATTCGAACTCCATAA 3036 0.4038 MKPDETASASGYASWSWTVVCLFISGIVVGSFIAGMLLNWKPLLSSKFWALLGYQDEALVITEGSSSSPRGYKYDVFLSFRGSDTRRSFVDYLYRRLLEEGILAFKDEKELNRGEIISSKLLQTIKDSRISIVVFSRGYARSKWCLDELVAIVDCHKEMKQELLPVFYDVDPRDVRYQTGPYEDAFDSHRERFREEPDKIYKWKSAMTYLSNISGLILRDQATTEGIDKMIEAVLDRLVYKFQSSRFADKNPESPQGRPSSQEVNKYDVFLSLRRAHTPHTFIDHLYQYLNKRGFSTFRSDEVMSESQLRQALKNSKILIIVFTSDYADSRFCLDEMATIVDCHRELKQTIIPVFCGVDPSDVRRQAGPYQKAFISYTEEFKQDPLKVQQWREAFKYITDLRGVVLRDGPETEAIGNIIQTVEQLFPKFPRPSSHSQGWIQSRLDGLEKLLKLEDDCILVVGIWGMGGSGKTTHALALYNRIFEKFEGACFIQDVSQVYRVGGATALQKQILCESLNVELSDIYNPLEISDLLRKLYRKKILIVLDGVDELRQLDLLAINRNMLGKGSRIIITTRNRHILDAYKVDFIHEISLLNNDEARELFLSACGIVDDQDYTRLIPRVLEYAHGLPLAIKVLGSFLQYRDVTFWEDTLDRLRREPSFEIMKTLQTSFDGLDDEDREIFLHIACFFHGKKVDFVKEVLSCCGFLVEIGIQTLLDKSLITIQNEEIHMHDLLQDLGKKIVHEEYPNNPGLRSRLWLYEDFSFVLKSNTATSKVKDIVLYEDASISEYEDLNIEGLSKIRNLELLILYDLHFSGRLTSLPNELRYLFWHGYPFYSLPSLEPYNRLVGLNLPNSNIERPWYGCKDFPHLERVDLSYSKYLRETPNFEGSPRLKRLDFTGCRELMEVHPSIGHLKELAYLSFRDCDMLVTLNLDHKCKLSSLKVLDLYSCRHLENTPDFTGLPNVEHIDLGKCESLSTVHHSIGNLEKLKFLNVPADIDLPKLGGVRIIRTP* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1435 1011 Gene3D - 71 245 IPR035897 -
Amo10g1435 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 243 IPR044974 GO:0006952
Amo10g1435 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 260 953 IPR044974 GO:0006952
Amo10g1435 1011 SUPERFAMILY L domain-like 782 993 - -
Amo10g1435 1011 SMART till_3 266 401 IPR000157 GO:0007165
Amo10g1435 1011 SMART till_3 73 213 IPR000157 GO:0007165
Amo10g1435 1011 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 260 953 - -
Amo10g1435 1011 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 66 243 - -
Amo10g1435 1011 Pfam NB-ARC domain 448 665 IPR002182 GO:0043531
Amo10g1435 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 436 685 IPR027417 -
Amo10g1435 1011 Gene3D - 261 425 IPR035897 -
Amo10g1435 1011 ProSiteProfiles TIR domain profile. 72 238 IPR000157 GO:0007165
Amo10g1435 1011 SUPERFAMILY "Winged helix" DNA-binding domain 662 766 IPR036390 -
Amo10g1435 1011 Gene3D - 593 675 IPR042197 -
Amo10g1435 1011 ProSiteProfiles TIR domain profile. 265 426 IPR000157 GO:0007165
Amo10g1435 1011 Gene3D - 426 589 IPR027417 -
Amo10g1435 1011 SUPERFAMILY Toll/Interleukin receptor TIR domain 65 215 IPR035897 -
Amo10g1435 1011 Gene3D Ribonuclease Inhibitor 935 1002 IPR032675 -
Amo10g1435 1011 Gene3D Ribonuclease Inhibitor 784 934 IPR032675 -
Amo10g1435 1011 Pfam TIR domain 73 238 IPR000157 GO:0007165
Amo10g1435 1011 Pfam TIR domain 266 397 IPR000157 GO:0007165
Amo10g1435 1011 PRINTS Disease resistance protein signature 460 475 - -
Amo10g1435 1011 PRINTS Disease resistance protein signature 535 549 - -
Amo10g1435 1011 PRINTS Disease resistance protein signature 626 640 - -
Amo10g1435 1011 PRINTS Disease resistance protein signature 936 952 - -
Amo10g1435 1011 SUPERFAMILY Toll/Interleukin receptor TIR domain 265 403 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1435 Amo-Chr10 44087665 44093706 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1435 267 1000 WRKY Transcription Factor Family AT4G12020 31.593 1.01e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1435 - - aip:107613207 1438.71