Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1434 ATGAGTTCAAAGAATGACAGCACGCTACTCTCTGCCAGTTCTTCAGACAAATCTGGTAATAAGTCTAAGAAATCCTCACTTAGGCGGAAATTCAGGGCCCTACTGGGCTTTCCTAAACCTTCAGATTCAAGCCCGTTGGGCCATCCACACCTCGCTTCTACTTCTGCTAACGTCTTCGAAACTGCAGCACTTTCATCTCGTCCTGTCTTCAAGTATGACGTGTTTCTCAGTTTCAGAGGCACTGATACTCGCAACACTTTCGTTGATCATCTTTACAATAATCTCATCAGGAAAGGTATCTTCACCTTTATGGATGACAAGAGGCTCCACAAGGGAGAGCCAATTTCGTCGCAGCTCATTCAAGCAATTCGAGATTCAAGGGTTTCAATCGTCGTGTTCTCGAAAGATTATGCTGGTTCTGCATGGTGTTTGGAGGAAATGGCTACAATAGCTGAATGCAAGAAGGAATTGGGACAGAAAGTTTTCCCCATTTTCTATGATGTGGATCCTTCTCATGTTCGAAATCAGAGTGGAGCGTATGAATTTGCATTTTTGCTTGCATTGAAATACAATGTTGACCGGGTTGCGAGGTGGAAAAGCGCTATGACGAGCTTGGCCAATTCGGTTGGTTGGGATGTCAGAAACAAGCCAGAGTATACAGAAATTAAAGAAATTATTCAAAAGGTAGTGAAAACATTGAACCACAGATTCTCAGGGTTTGATGATGATCTGGTCGGGATACAACCCCGGGTAGAAAGATTAGAAGCGCTTTTAAAATTAAGCTCAAAAGATGATAATCCACGGGTTATTGGAATTTGTGGCATGGGTGGTATAGGAAAAACAACTCATGCCAAGGTCTTATATGACAAAATCTCTTACCAATTCGATGGTTGTTGTTTTATTGAGAATGTAAGCCAAAGTTATAGAAATGGAGGTGCTGTTATTATTCAAAAGCAAATTCTTAATCAAGCTCTAGATGAACAAAATCTAGAGATGTTTGGTCACTTTGAGATATCTGGCATTTTAAGAGATAGGCTGTCTTGCATAAAGGTCCTTATAGTTCTTGACAATGTTGATGAACTGCAGCAATTGGAGGAATTGGCTATAAGTCCTAAATTACTTGGGAGAGGAAGTAGAATTATCATAGTCACTAGGAATGAGCATATTCTAAAAGTTTATGGAGCAGATGAAGTTGATAAGGTTGCACTGTTGGATGATGATGAAGCTCTTAAACTTCTTTTAAGAAAAGCATTGGGTGATGATGGTTCTAGCAGTAGCAAATACATGCATCTAATTCCTAAAATACTGGAATATGCTCAAAATCTTCCATTAGCTGTCAAAATAGTGGGTTCGTTGTTGCATTCCCGAGATGTTACCCAGTGGACTGATGCCTTGAAAAGAATGAGGAAAATTCCAAACAAAAATATTATGGACGTGCTTCAGATAAGCTTTGAAGGATTGGAATTATATGAGAAAGAAATATTTCTACACATTGCTTGTTTCTTTCATGGAGAGAGAGAAGATTATGTAAAACAAATTCTAGATAGTTGTGGATTACATCCTCATATTGGAATTCCAACTATTATGGAGAAATCACTCATAACCATTAGAAATCAAGAGATTCATATGCATGAAATGTTACAAGAATTGGGGAAGAAAATTGTTCGGGAAAAATCTCCAGAAGAACCAGGATCATGGAGTAGGTTGTGGCTTTATCACGATTTCTACCGTGTATTGACTTCAGCAACGGGATCTTATAGTGTTAAAGCCATAGTTTTGGATCAGAAAGAGGATGTTTCCAAATATAGTCAGCTGAGAATTGAAGGATTATCAAAAATGATGGGTCTTAAGTTACTCATATTACATCACAAGAATTTTTCAGGAAGTCTTTATTTTCTTTCTGACAACTTGCAATATATTTCATGGCATGGCTACCCTTTCTCTTCTCTACCAGTAAATTTTGATCCACATAGTCTTGTTGAACTAAATTTGCGTGATAGCAACATCAAACTACTATGGGAAAGCCCGAAGAGTTTCCCATGTTTGAAAAAGATGGATTTGAGCAACTCGAAAGATCTTGTGAAGACGCCAAATTTTGAATGGATCCCAAATCTTAAGTGGCTGGATCTTTCAGGATGCACAAATCTATCACAGGTTCACCCCTCAATTGGACTTCTTACTCAACTTGCTTACCTCAGTTTGCGTAATTGTAGCAATTTGGTAAGCATTGATCTCAACACTGAATATAAGTTATATTCTTTGAAAGTTCTACACCTCTCTGGCTGCACAAAACTAGAGAACACCCCAGATTTTACAGGGCTGTCAAATCTGGAGTACCTTGACCTTGAAAAATGTGTAAGTTTATCCGCAGTTCATGAATCTATTGGGGCTCTTGTAATGCTGAAGTTCTTCAGTTTGAGAGGGTGCATAAATCTTGTCCAGCTACCTGCCAGTGTCAACAATTTGACATGTCTTCAAAATCTAGATTTACATGACTGCTTCGAACTGATGAATCTTCCGCTAAGACAAATAAGCATGTTATCCCCCTATCTAAGATATTTGATATTTTTGGATCTTGGATCCAGCAAAATAAAAGTAATTCCCGATGCTATTGGAGCGCTAAAGTGCTTAGAAAGACTAAATCTTCAAGGAAGCAGAATTCAATCTTTACCCGAAACCATCAAGAGCCTTTCCTGCCTGGCATATTTAAACTTGTCAGGTTGCCATGAGCTTGTTGAATTGCATGATCTTCCATTTAAGAGTGCTTCATCAGGGGGAAGGTATTTTAAGAAAGTATCAGAAGCTCGTAATCATAGATCGGGATTATATATTTTCAACTGCAGTAGGGTTATGAAATGCCACTGGATGTTAGTTGCAATTTCCTGGTTAGCAAGACTTGTTAAGGAACCCGGTCATTTTCGATGTGGTTTTGACATTATAGTACCTTTTATGGGTATTGAAATTCCAAAATGGTTTTTCCATCATCGATTTGTAGGTGGCTCAATAATAAGGATATTAAGCATTGACACTGATGTAAATGATTGGCTTGGTTTTGCCTTTTGTGTAACATTTGAGGTGAACAAAAATAGTCGAGCAAATCCTGGCTCCTCATCAAAGCTGCCACGCCCTTTGTATCTTTCATTTGAAAGTGAAAACACAGAAGAATGCTTTGACTTGCCGGCTTGTTTAGACATGGAGAAGGAGCATGTTGGTCCAATATCAAAATATTGCTGGATAATCTATATCTCTCGTGCACACTGCCATTTTGTGAAAACAGGAACCTGTATCACGTTTAAAGCATGCCCGGGCTTACAGGTGAAGGAATGGGGCCTACGCATGGTATGCATGGAAGATATAGTGTTGATAAGGAGAGAATTCCGTGAAATGGATTGTAAAGGTTATGATCCTTGGTTTCGTCGTGGTATACAAGAAATCTCTGATCCGATAATCTGTCTTCCCCATAATTGTTTCTATACTACGGATGAGCATGAGAATGAGGGCTATAATAGATTAGGGCCTAAAATCCAGCTACCCTACAATTGGAATGTAACTGATGAAGAGGAAAAGGAGAATCTGGATGCTAAGGCCAAGGAAATTAATCTTTACAATCTTGGTCATTCTTCCATAGAGGAAGTGCAAGTTGTGAACGGCCATTCTTCCTCGGAGGAAGAGGAAAGCATGAAAATGAAAGGCAAAGCATTGCAGGTAGCCTTTGATGAGGAAAGTGATTGCTCTTACATGAGTGATTTATCTCCGAGGTAA 3762 0.3894 MSSKNDSTLLSASSSDKSGNKSKKSSLRRKFRALLGFPKPSDSSPLGHPHLASTSANVFETAALSSRPVFKYDVFLSFRGTDTRNTFVDHLYNNLIRKGIFTFMDDKRLHKGEPISSQLIQAIRDSRVSIVVFSKDYAGSAWCLEEMATIAECKKELGQKVFPIFYDVDPSHVRNQSGAYEFAFLLALKYNVDRVARWKSAMTSLANSVGWDVRNKPEYTEIKEIIQKVVKTLNHRFSGFDDDLVGIQPRVERLEALLKLSSKDDNPRVIGICGMGGIGKTTHAKVLYDKISYQFDGCCFIENVSQSYRNGGAVIIQKQILNQALDEQNLEMFGHFEISGILRDRLSCIKVLIVLDNVDELQQLEELAISPKLLGRGSRIIIVTRNEHILKVYGADEVDKVALLDDDEALKLLLRKALGDDGSSSSKYMHLIPKILEYAQNLPLAVKIVGSLLHSRDVTQWTDALKRMRKIPNKNIMDVLQISFEGLELYEKEIFLHIACFFHGEREDYVKQILDSCGLHPHIGIPTIMEKSLITIRNQEIHMHEMLQELGKKIVREKSPEEPGSWSRLWLYHDFYRVLTSATGSYSVKAIVLDQKEDVSKYSQLRIEGLSKMMGLKLLILHHKNFSGSLYFLSDNLQYISWHGYPFSSLPVNFDPHSLVELNLRDSNIKLLWESPKSFPCLKKMDLSNSKDLVKTPNFEWIPNLKWLDLSGCTNLSQVHPSIGLLTQLAYLSLRNCSNLVSIDLNTEYKLYSLKVLHLSGCTKLENTPDFTGLSNLEYLDLEKCVSLSAVHESIGALVMLKFFSLRGCINLVQLPASVNNLTCLQNLDLHDCFELMNLPLRQISMLSPYLRYLIFLDLGSSKIKVIPDAIGALKCLERLNLQGSRIQSLPETIKSLSCLAYLNLSGCHELVELHDLPFKSASSGGRYFKKVSEARNHRSGLYIFNCSRVMKCHWMLVAISWLARLVKEPGHFRCGFDIIVPFMGIEIPKWFFHHRFVGGSIIRILSIDTDVNDWLGFAFCVTFEVNKNSRANPGSSSKLPRPLYLSFESENTEECFDLPACLDMEKEHVGPISKYCWIIYISRAHCHFVKTGTCITFKACPGLQVKEWGLRMVCMEDIVLIRREFREMDCKGYDPWFRRGIQEISDPIICLPHNCFYTTDEHENEGYNRLGPKIQLPYNWNVTDEEEKENLDAKAKEINLYNLGHSSIEEVQVVNGHSSSEEEESMKMKGKALQVAFDEESDCSYMSDLSPR* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1434 1253 Gene3D Ribonuclease Inhibitor 750 845 IPR032675 -
Amo10g1434 1253 SUPERFAMILY L domain-like 610 919 - -
Amo10g1434 1253 MobiDBLite consensus disorder prediction 1 20 - -
Amo10g1434 1253 Gene3D Ribonuclease Inhibitor 586 749 IPR032675 -
Amo10g1434 1253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 679 IPR044974 GO:0006952
Amo10g1434 1253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 689 744 IPR044974 GO:0006952
Amo10g1434 1253 SUPERFAMILY "Winged helix" DNA-binding domain 475 579 IPR036390 -
Amo10g1434 1253 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 750 922 IPR044974 GO:0006952
Amo10g1434 1253 PRINTS Disease resistance protein signature 269 284 - -
Amo10g1434 1253 PRINTS Disease resistance protein signature 345 359 - -
Amo10g1434 1253 PRINTS Disease resistance protein signature 439 453 - -
Amo10g1434 1253 PRINTS Disease resistance protein signature 700 716 - -
Amo10g1434 1253 SUPERFAMILY Toll/Interleukin receptor TIR domain 69 211 IPR035897 -
Amo10g1434 1253 Pfam TIR domain 71 235 IPR000157 GO:0007165
Amo10g1434 1253 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 235 498 IPR027417 -
Amo10g1434 1253 Gene3D - 232 397 IPR027417 -
Amo10g1434 1253 Pfam C-JID domain 984 1118 IPR045344 -
Amo10g1434 1253 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 689 744 - -
Amo10g1434 1253 SMART till_3 71 208 IPR000157 GO:0007165
Amo10g1434 1253 Pfam NB-ARC domain 257 470 IPR002182 GO:0043531
Amo10g1434 1253 Gene3D - 403 488 IPR042197 -
Amo10g1434 1253 ProSiteProfiles TIR domain profile. 70 234 IPR000157 GO:0007165
Amo10g1434 1253 Gene3D Ribonuclease Inhibitor 846 926 IPR032675 -
Amo10g1434 1253 MobiDBLite consensus disorder prediction 1 27 - -
Amo10g1434 1253 Gene3D - 66 231 IPR035897 -
Amo10g1434 1253 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 66 679 - -
Amo10g1434 1253 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 750 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1434 Amo-Chr10 44080238 44084813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1434 72 889 WRKY Transcription Factor Family AT4G12020 30.595 3.46e-88 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1434 - - adu:107462392 1248.03