Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1430 ATGAAGGATGCACAAGCTAACGCTGAGGTGCTAGGATATTACCGATGCAGCAGCTCAAAAGGGTGCCCGGCGAGGAAGCAAGTTGAACGAAGCCGTGTGGACCCCACAAAGCTCATCGTCACCTACAACTACGAACACAACCACTCTCTTCCGTCCGCCGCTGGCTTCCCGCCGGAGGATCTGACGGTATTCTCGAGCCACGTCGATCTCGACCTCTCCGGCGACTCCGCAGTACTTCTCAGCCACCACAACCACCACGGATTCGGGTGGTTCGACGACGTGGCCTCAGCCGGCGGCGTCCTGGAGAGTCCGATCTGTGGCTGCGTTGATGACATGGCGCTGACGGCGGAGGAAGAGGACGGGGAAGAGTCGCTTTTCGCCGGCCTCGGCGAGCTGCCGGAGTGCTCGGCTGTTTTCCGGCGAAGGAATATTCCAAGCGCCAGCGCGATCCAGTGCGGTGGCATCACAGGATAA 474 0.6034 MKDAQANAEVLGYYRCSSSKGCPARKQVERSRVDPTKLIVTYNYEHNHSLPSAAGFPPEDLTVFSSHVDLDLSGDSAVLLSHHNHHGFGWFDDVASAGGVLESPICGCVDDMALTAEEEDGEESLFAGLGELPECSAVFRRRNIPSASAIQCGGITG* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1430 157 SMART WRKY_cls 2 50 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g1430 157 Pfam WRKY DNA -binding domain 4 48 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g1430 157 SUPERFAMILY WRKY DNA-binding domain 9 51 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g1430 157 PANTHER OS01G0750100 PROTEIN 12 52 - -
Amo10g1430 157 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 52 IPR044810 GO:0003700
Amo10g1430 157 Gene3D WRKY domain 1 52 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g1430 157 PANTHER OS01G0750100 PROTEIN 79 152 - -
Amo10g1430 157 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 79 152 IPR044810 GO:0003700
Amo10g1430 157 ProSiteProfiles WRKY domain profile. 1 51 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1430 Amo-Chr10 44066358 44067720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1430 12 143 WRKY Transcription Factor Family AT1G29280 38.710 2.76e-25 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo10g1430 WRKY 2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1430 - - ahf:112707218 281.182