Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1413 ATGAGCGATTGTAAACGCTGTGTACCGTTAGCTTCTGCCATGGAAGCTTCTTCTTCCAGCGAAGATAATGTTTCTAAGAAAAGGAAGACCACCACTTCGTATGAGTTTTTGTTAACCTCTACTTCGGATGCGCCGCACCGCCAGCGTCTTCCTAGCTTCGGTTATTCTCTCGCCGCGGCTAGGTTCAACGACGTCACCGTGTCGCCGGAAGGTTCGCTCAATTCCTCCGGCACGGTTGTTTCCTTCGAATTCTGCTCAGATCGCTCTCCGCGCTCTTTCTGTAGCTCCGCCTTTGAAGTCGCGAAGGAGCTCGACACGACGCCGTTAGATCTGGAGGTTCAGACCAAGGGTTTCGTAACTGTGGACTCAACGTTCCACAATTTCAAATCCAGCAGTTTGTTGAGTGAGCAGTGTGGAGACTCGGAAGAATCGGCGGCTGTGGTGAGGCAGCATGAGCAAAAATCTACGGCAGCGAAGAAGGAGAAGGTGCCAGAGGTGGAGATTGAAGAGTTCTTCGCAATGGCTGAGAAGTACGAACAAAAACGGTTCGCTGAGAAGTACAACTTTGATATTGTTGCAGATATGCCGTTGGAGGGTCGGTACCAGTGGGTTCGTTTACAGTGA 624 0.508 MSDCKRCVPLASAMEASSSSEDNVSKKRKTTTSYEFLLTSTSDAPHRQRLPSFGYSLAAARFNDVTVSPEGSLNSSGTVVSFEFCSDRSPRSFCSSAFEVAKELDTTPLDLEVQTKGFVTVDSTFHNFKSSSLLSEQCGDSEESAAVVRQHEQKSTAAKKEKVPEVEIEEFFAMAEKYEQKRFAEKYNFDIVADMPLEGRYQWVRLQ* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1413 207 Gene3D p27 136 207 IPR044898 -
Amo10g1413 207 Pfam Cyclin-dependent kinase inhibitor 162 206 IPR003175 GO:0004861|GO:0005634|GO:0051726
Amo10g1413 207 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 2 207 - -
Amo10g1413 207 MobiDBLite consensus disorder prediction 11 30 - -
Amo10g1413 207 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 2 207 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1413 Amo-Chr10 40984354 40986172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1413 165 207 Core Cell Cycle Gene Families AT1G49620 67.442 5.94e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1413 - - pvu:PHAVU_003G295400g 192.586