Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1389 ATGATGATAAGGTCAAGCATCATCGCTGTACACACACTAAACAAATATCTTCAAATCCCAACAAAATCAAACTCCAATACCCAATCATTATTATCTCTACCCATCCCAAGAAACCTTCCTTCTTTTTCCTCATTGAATCTCGCATCTTCAAAGTTTCTACGGTGCTCTTCTTCTTCTTCATCGTCATCCACCATGGATTCATCATCAACTTCGACCAGCATTGACACCAATGAGGAACTAGCCTACGACCTCCCACCGATCATGAAAGTCTACAAAAACGGCCGCGTGGAGAGGCTTGCCGGCGAAGACGTTGTTCCTCCGTCGCTGGACCCCGTAACAAACGTTGAATCCAAAGATGTAGTGATCTCAWAAGASGAAGGAATCTCCGCACGCCTTTTCCTTCCGAAATCAATAACCGAAAACCAGACAACAAAGAACAAGCTTCCTCTCTTTGTTTACTTTCACGGAGGAGCGTTCTGCATCGAAACGCCTTTCTCAGCCAACTACCATAACTTCCTAAACTCCGTTGTTTCCAAGGCTGGCGCCGTTGGCGTCTCCGTTCACTATAGAAGAGCACCGGAACACCCCGTCCCCGCTGCACACCAAGATTCATGGCTTGCGCTGAAATGGATTGCTTCGCATGCCGACGGAAATGGCCCTGACGAGTGGCTGAACCGCGACGCGGACTTTGGGAAAGTTTTCTTCGCCGGCGACAGTGCGGGTGCGAATATTGCTCATTATTTGGGAGTTTGGGTCGGGTCGGAAAGGTTACCGGGTTTGAAAATTGAAGGGATTGTGTTGGTGCATCCTTATTTTTGGGGATCGGAGAGGATCGGATCGGAGGCGTACCATGCGGAAGCAGCGGAGAAGGTGGATGGTTTGTGGCGGTTTTCGTGCCCGACGACGAGTGGATCCGACGACCCGATTATAAACCCGGATAAGGATCCGAATGTTGGGAAGTTGGCGTGTGAGAGGGTTCTTGTTTTGGTTGCTGAGAAAGATTTGTTGAGGGATAGGGGTTTTTTCTACAAGGAGGTTCTTGAGAAGAATGGTTGGGGTGGAGTTGCACAAGTTGTTGAAGCCAAAGATGAGGGTCACGTGTTCCACATGTTTAAACCAACGTGTGACAATGCTATGCTCTTGCTCAACCAAGTTGTGTCCTTTATCAACCAAGATTAA 1179 0.4818 MMIRSSIIAVHTLNKYLQIPTKSNSNTQSLLSLPIPRNLPSFSSLNLASSKFLRCSSSSSSSSTMDSSSTSTSIDTNEELAYDLPPIMKVYKNGRVERLAGEDVVPPSLDPVTNVESKDVVISXXEGISARLFLPKSITENQTTKNKLPLFVYFHGGAFCIETPFSANYHNFLNSVVSKAGAVGVSVHYRRAPEHPVPAAHQDSWLALKWIASHADGNGPDEWLNRDADFGKVFFAGDSAGANIAHYLGVWVGSERLPGLKIEGIVLVHPYFWGSERIGSEAYHAEAAEKVDGLWRFSCPTTSGSDDPIINPDKDPNVGKLACERVLVLVAEKDLLRDRGFFYKEVLEKNGWGGVAQVVEAKDEGHVFHMFKPTCDNAMLLLNQVVSFINQD* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1389 392 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 151 167 IPR002168 GO:0016787
Amo10g1389 392 Gene3D alpha/beta hydrolase 76 392 IPR029058 -
Amo10g1389 392 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 233 245 IPR033140 -
Amo10g1389 392 PANTHER CXE CARBOXYLESTERASE 77 390 - -
Amo10g1389 392 PANTHER ARYLACETAMIDE DEACETYLASE 77 390 - -
Amo10g1389 392 SUPERFAMILY alpha/beta-Hydrolases 90 391 IPR029058 -
Amo10g1389 392 Pfam alpha/beta hydrolase fold 151 370 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1389 Amo-Chr10 39377610 39379228 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1389 77 390 Carbohydrate Esterase AT3G48690 46.894 4.35e-97 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1389 - - aip:107613716 605.134