Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1377 ATGAAGTTGCGGTTATTCATCGTTGTGCTTGTCCTTCTAAGCTTCATAGTTTCACTCTTTGAATTGATTGTAGCTGATTTAAACTCTGACAAACAAGCTCTCTTAGAGTTTGCTTCAGCCGTTCCACATGCACCAAGGCTAAACTGGAATGAATCTACTTCAGTTTGCAACTCATGGATTGGTGTGACTTGTAACTCGAACAGAACCCGAGTCACCGGCATCCGTCTCCCGGGAATTGGACTAACCGGTTCAATTCCAGAGAACACTTTAGGAAAACTAGACACTCTTAGAGTCCTTAGCCTTCATTCAAATGGCCTTAAAGGAAATCTTCCTTCTGACATAGTTTCCATTCCTTCACTCCAATTTGCACTGCTTCACCACAATAATTTCTCAGGTCCAATTCCATCCTCTGTCTCCCCTAAACTCGTGGCATTCGATGTTTCCTTTAACTCCTTCTCTGGAAGAATTCCACCAGCATTTCAGAATCTGAGAAGACTCACCTGGTTGTATTTACAAAACAACAACATTTCTGGAACTATCCCTGAATTCAACCTTCCAAGGCTTAAACAATTGAATTTGAGCTATAATAACCTGAACGGAACAATTCCAAATTCTGTTAAGACATTTCCTTACACTTCTTTCGTAGGTAACTCGCGCTTATGCGGACCGCCTCTCAACAATTGCTCATCGATATCCCCTTCTCCATCTCCTTCCCCTGAGTATCAACCATCCTCTCCATCAACTACACAAGATCAAAAGGATCATAAGAATAACTTTGGCCTAGCTACTATACTTGCTCTTGTCATTGGAGGCATTGCATTTCTCTCCCTGCTAGTTTTAGTGTTCTTTATATGCTGTCTGAAGCGAAAACCGAAAGACAGTACTAAAAAAAGCGGTGGCATACTCAAAGGGAAGGGATCTTGTGCTGGAAAGACTGAGATTTCCAAGAGTTTTGGGAGTGGAGTTCAAGAGGCCGAAAAGAACAAGTTATTCTTCTTTGAAGGTTCATCTTATAGCTTTGATCTTGAGGACTTACTGAAGGCTTCGGCCGAAGTTCTTGGTAAAGGGAGTTATGGAACAGCATACAAGGCTGTTTTGGAGGAAGGAACAACTGTGGTAGTTAAGCGGTTGAAGGAAGTTGTTGTTGGAAAGAAGGAGTTTGAGCAGCAGATGGAAATTGTTGGGAGGATTGGACGCCACCCGAATGTCATGCCGCTTCGTGCTTATTACTATTCCAAAGATGAGAAGCTTCTAGTTTATAACTTCATGCTTGGTGGAAGCTTGTTTCACTTGTTGCATGGAAACAGGGGTGCAACAAGAACTCCATTAGACTGGGATTCAAGGGTGAAGATTTCACTTGGAGCAGCCAAGGGAGTTGCATTCATTCACTCTGAATGCGGTCCAAAGTTCACACATGGCAACATCAAATCCACCAATGTTCTCATATCCCAAGAACTTGATGCCTGCATATCCGATGTTGGCTTGCCTCCACTGATGAACACTCCGGCAACCATGTCAAGAGCCAATGGCTACCGTGCTCCAGAAGTAACTGATGCGAAGAAGATCACACAAAAATCTGATGTGTACAGCTTTGGTGTGCTGCTTCTTGAAATGTTGACAGGGAAGACACCAATGAGGCATCCGGGGCATGAAGACATCGTCGATCTTCCAAGGTGGGTGAAGTCTGTTGTTAGAGAAGAATGGACAGCTGAAGTTTTCGATGAGGAGCTTCTAAGAGGCCAATACGTTGAAGAGGAGATGGTGCAGATGCTTCAGATTGCATTGGCTTGTGTTGCTAAGGCACCTGATATGAGGCCTAGAATGGATGAAGCTGTTAGGATGATAGAGGAAATAAAGCACCCCGAGTCAAAGAACCGGCCGTCCTCTGAGTCGGAGTCTAATGCGCAAACACCATAA 1917 0.4387 MKLRLFIVVLVLLSFIVSLFELIVADLNSDKQALLEFASAVPHAPRLNWNESTSVCNSWIGVTCNSNRTRVTGIRLPGIGLTGSIPENTLGKLDTLRVLSLHSNGLKGNLPSDIVSIPSLQFALLHHNNFSGPIPSSVSPKLVAFDVSFNSFSGRIPPAFQNLRRLTWLYLQNNNISGTIPEFNLPRLKQLNLSYNNLNGTIPNSVKTFPYTSFVGNSRLCGPPLNNCSSISPSPSPSPEYQPSSPSTTQDQKDHKNNFGLATILALVIGGIAFLSLLVLVFFICCLKRKPKDSTKKSGGILKGKGSCAGKTEISKSFGSGVQEAEKNKLFFFEGSSYSFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLKEVVVGKKEFEQQMEIVGRIGRHPNVMPLRAYYYSKDEKLLVYNFMLGGSLFHLLHGNRGATRTPLDWDSRVKISLGAAKGVAFIHSECGPKFTHGNIKSTNVLISQELDACISDVGLPPLMNTPATMSRANGYRAPEVTDAKKITQKSDVYSFGVLLLEMLTGKTPMRHPGHEDIVDLPRWVKSVVREEWTAEVFDEELLRGQYVEEEMVQMLQIALACVAKAPDMRPRMDEAVRMIEEIKHPESKNRPSSESESNAQTP* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1377 638 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1377 638 Pfam Leucine Rich repeats (2 copies) 165 202 IPR025875 -
Amo10g1377 638 Gene3D Phosphorylase Kinase; domain 1 312 422 - -
Amo10g1377 638 Gene3D Ribonuclease Inhibitor 141 229 IPR032675 -
Amo10g1377 638 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Amo10g1377 638 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1377 638 PANTHER OS05G0588300 PROTEIN 4 636 - -
Amo10g1377 638 CDD STKc_IRAK 353 618 - -
Amo10g1377 638 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
Amo10g1377 638 Gene3D Ribonuclease Inhibitor 28 140 IPR032675 -
Amo10g1377 638 SUPERFAMILY Protein kinase-like (PK-like) 351 618 IPR011009 -
Amo10g1377 638 MobiDBLite consensus disorder prediction 231 254 - -
Amo10g1377 638 PANTHER RECEPTOR-LIKE KINASE 4 636 - -
Amo10g1377 638 SUPERFAMILY L domain-like 40 225 - -
Amo10g1377 638 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Amo10g1377 638 MobiDBLite consensus disorder prediction 616 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1377 Amo-Chr10 37585733 37587856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1377 10 633 Receptor kinase-like Gene Family AT5G58300 59.649 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo10g1377 Pkinase 4.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1377 - - aprc:113868460 1006.13