Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1367 ATGTTGTCACAAATACATCACAAAAACATTTTCAAGCACTATGGACTTTGTCTTCACCATCGGTTCATGTTTTTGGTATATGAATACATGGAAAGAGGAAGCTTATTTTATGCCTTGAACATGGATGATAAAGAAGCTAAGGAGTGTTGTTGGAGCAAGAAGTTCACAAGTTTGACCTCATTCCATCTTTCTAACAATCAATTCGGTGGAAACATACCATTAGAGATAGGAATTCTTGATTCTCTTTGTAATGTTAACCTATCCAATAACAAGTTAGAGGGATTGATCCCATCTCCCATGCTAAACTATATCAATTTTGGTGAAGTTGACTTGAGTAATAATCTGTTAAGTGGATATATTCCCTCAAAAATCGGTTATGTTAAGAAACTTGATATGAGCCACAATCTTCTTAGTAGTAGTGTACCCTTTTTTTTGGATCTTAGCTATAATAATCTCACAAGAAATTTACATGTAGAACTTGCAAGCATACCTCGTATAAATTTGTCATTCAACTTTTTTGAGTGTCTACAAGGCTGCAAGGATTTTTTTGCAAAATCCTTGATTGGTAATAATCTAATGTCTGTCAACTCTTCCGTTCAAGATCAAAACACCAAAAAATCAAATCACCTAGTTATAATTGCTCTTCCTATCAGTTGCTTCTTCCTAATTGTCATTTTGTGGGTATATTTTGTTTTATTCGACGCACTAAGAAGAGACTTATTTTCTATTTTGAACTATGATGGTAAAATTGTATTTGAAGACATCATTAAAGCAACACAAGACTTTGACATCAGATACTGCATAGAAACTAGTATTTATGACTATGTGTATAGAGCACAACTTTCAAATGACAAAATTTTTGCATTGAAAAAACTTCACTAA 882 0.3265 MLSQIHHKNIFKHYGLCLHHRFMFLVYEYMERGSLFYALNMDDKEAKECCWSKKFTSLTSFHLSNNQFGGNIPLEIGILDSLCNVNLSNNKLEGLIPSPMLNYINFGEVDLSNNLLSGYIPSKIGYVKKLDMSHNLLSSSVPFFLDLSYNNLTRNLHVELASIPRINLSFNFFECLQGCKDFFAKSLIGNNLMSVNSSVQDQNTKKSNHLVIIALPISCFFLIVILWVYFVLFDALRRDLFSILNYDGKIVFEDIIKATQDFDIRYCIETSIYDYVYRAQLSNDKIFALKKLH* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1367 293 Gene3D Ribonuclease Inhibitor 54 200 IPR032675 -
Amo10g1367 293 Gene3D Phosphorylase Kinase; domain 1 237 293 - -
Amo10g1367 293 SUPERFAMILY L domain-like 49 176 - -
Amo10g1367 293 Pfam Protein tyrosine and serine/threonine kinase 1 45 IPR001245 GO:0004672|GO:0006468
Amo10g1367 293 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 54 293 - -
Amo10g1367 293 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 54 - -
Amo10g1367 293 SUPERFAMILY Protein kinase-like (PK-like) 1 43 IPR011009 -
Amo10g1367 293 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 54 293 - -
Amo10g1367 293 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 54 - -
Amo10g1367 293 Gene3D Transferase(Phosphotransferase) domain 1 1 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1367 Amo-Chr10 36801279 36802435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1367 2 54 Receptor kinase-like Gene Family AT4G08850 54.717 4.76e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo10g1367 PK_Tyr_Ser-Thr 1.4e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1367 - - aprc:113851126 176.022