Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1365 ATGATGTCACAAATCTGTCACAGAAACATTGTCAAGCTCCATGGATTTTGTCTCCACAATCGGTGCATGTTTTTGGTATACGAATATATGGAAAGAGGAAGCTTGATTTATGCCTTGAATATGGATGATGATGAAACTAAGGAGTTAAGAGCATTGGTGTCCTTAGAAGAGTTATACATAGAATTCAATCAAATAAATGGCTCCATTCCTTCAGAATTTCATAATTTGATCAACCTGCACATTTTACATCTTTCTCATAATTTCACGAGTTTGACCTCATTCCATCTTTCTAACAATCAATTCGACGGAAACATACCGTTAGAGATAGAAATTCTTGATTCTCTTTGTGATGTAAACCTATCCAACAACAAGTTCGAAGAATTGATCCCATCTCCCATGCTAAATTGTATTAGTTTTGAAGAAGTTGACTTGAGTAATAATCTGTTAAATGGAAACATTCCCTCAAAAATTGGTTTTGTTAAGAAACTAGATAGGAGCCACAATCTTCTTAGTGGTAGTGAATCCTTTTTTTTGGATCTTTGCTATAATAATCTCACAGGGAATTTACCTATAGAACTTTGTCCACAAGGCTGCAAAGATTTTTATGCAAAATAA 615 0.3398 MMSQICHRNIVKLHGFCLHNRCMFLVYEYMERGSLIYALNMDDDETKELRALVSLEELYIEFNQINGSIPSEFHNLINLHILHLSHNFTSLTSFHLSNNQFDGNIPLEIEILDSLCDVNLSNNKFEELIPSPMLNCISFEEVDLSNNLLNGNIPSKIGFVKKLDRSHNLLSGSESFFLDLCYNNLTGNLPIELCPQGCKDFYAK* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1365 204 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 1 46 - -
Amo10g1365 204 Gene3D Ribonuclease Inhibitor 37 88 IPR032675 -
Amo10g1365 204 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 54 193 - -
Amo10g1365 204 SUPERFAMILY L domain-like 48 193 - -
Amo10g1365 204 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 54 193 - -
Amo10g1365 204 Pfam Protein tyrosine and serine/threonine kinase 1 54 IPR001245 GO:0004672|GO:0006468
Amo10g1365 204 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 46 - -
Amo10g1365 204 SUPERFAMILY Protein kinase-like (PK-like) 1 44 IPR011009 -
Amo10g1365 204 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Amo10g1365 204 Gene3D Ribonuclease Inhibitor 89 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1365 Amo-Chr10 36799221 36800015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1365 19 204 Receptor kinase-like Gene Family AT1G72180 28.713 1.08e-16 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo10g1365 PK_Tyr_Ser-Thr 6.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1365 - - aprc:113851126 101.679