Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1359 ATGGTGGTTGGCTTCTATGCCAGTTGCTTCCTTATAGATAGTCAGAGTTCAACATGTTTTGCTCTTAATAGGAAGCTTGCAGACAAGATTGCAGCTTCTGGTTACTATGTGGTTGTTTCGGACTTCTTTTATGGTGAACCCTATGATCCTCAGAATACTAATAGACCTTTAGGAATTGAGACTGCTATAGAGGATAGTTCAATTGATTTTGGAGACTTCTTTAAAGGTCCATTACCAGGAAAGTTTCTTAAGCTTTTAGGTTTCTTGCCTTGTCACGTCTTGGTCACTCTGGACTCATTTTCTGGACTCATCAATGCACAAATTGTTTTCCAGCTTCTTGCACAGGTATATCCGAAGTTGCAAGATCTTCAGAAAAGAGAAGGCGAGGCTGGAAGAAAGAAAACAATTGGTCAAGTCCTCTTTTTACGTCCTTATGGGAATGACTTTAGTACCGAGTGG 459 0.4031 MVVGFYASCFLIDSQSSTCFALNRKLADKIAASGYYVVVSDFFYGEPYDPQNTNRPLGIETAIEDSSIDFGDFFKGPLPGKFLKLLGFLPCHVLVTLDSFSGLINAQIVFQLLAQVYPKLQDLQKREGEAGRKKTIGQVLFLRPYGNDFSTEW 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1359 153 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 103 153 IPR002208 GO:0015031|GO:0016020
Amo10g1359 153 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 46 90 IPR002208 GO:0015031|GO:0016020
Amo10g1359 153 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 46 90 - -
Amo10g1359 153 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 103 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1359 Amo-Chr10 35564718 35580507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1359 45 153 Chloroplast and Mitochondria Gene Families AT2G18710 51.220 1.08e-39 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1359 K10956 - adu:107457819 185.267