Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1341 ATGGAGATTAGTGCTTCTATTTCTACCTTATTATTATTACTATCATGGATGTGCTTCCTCCTCTTGTTCTTATTCCTCTTCTCAAATCTTCTAACAAAGAAACGAGACAAAGTCGAAAACGTAGCTAGTAAACCTAAGCTTCCACCTGGCTCAATGGGTTGGCCTTACGTTGGAGAGACTCTTCAGCTTTATTCACAGGACCCTAACATCTTCTTTGCGTCCAAACAGAAAAGATATGGGGAGATTTTTAAGACACACATACTAGGTTGTCCATGCGTGATGCTGGCGAGTCCCGAGGGTGCGCGGTTTGTGTTAGTGACACACGCGCACTTGTTCAAGCCAACATACCCAAAGAGCAAAGAGAAGCTCATAGGTCCTTCTGCATTGTTCTTCCACCAAGGTCACTACCATACCCTTATAAGGAAGCTTGTCCAGAACTCCCTCTCCCCGGACACCATCCGCCGACTCATCCCGGACATCGAGACCGAGGTTGTTTCCTCCTTGGAATCCTGGGTCTCCGCCGGAGACGTCGTCAACGCCTTCCAAGAAATGAAAAAGTTCTCTTTCAACGTTGGAATCCTCTCAGTGTTTGGTAACTTGGAAGGAAATTATAGAGATCAGCTTAAAGAGAACTACAGCATAGTTGAGAAAGGCTACAATTCTTTCCCAACAATGATTCGTGGAACTTCATACTCCAAAGCACTCTTGGCTAGGAAGAGGATCAGGGAGATAATAAGTGAAATAATTAGCAAGAGGAAGGAGCAAAGATTGATGGAGAAGGATCTATTGGGTCACATGTTGAACTACAGAGATGAAAAGGGGAAAACATTAACGGATGAACAAATAGCAGATAACGTTATTGGGGTTCTGTTTGCGGCTCAGGACACAACAGCAAGTGTTCTAACATGGATTCTCAAATATCTTCATGATGACCAGAAACTTCTTGAAGCAATCAAAGCAGAGCAGATGGCGGTATATGAAGCAACTAAACAAGGGAAGATGCCATTGACATGGGGTCAAACCAGAAATATGCCATTTACTCATAGGGTGATATTGGAAAGCCTAAGGATGGCAAGCATCATATCTTTTACATTTAGGGAGGCTGTGGTTGATGTAGAATATAAAGGATATCTCATACCAAAAGGTTGGAAGGTAATGCCACTATTCAGGAACATCCATCATAATCCAGAATTCCACCCTGCTCCTCACAATTTTGACCCCTCAAGATTTGAGATGGCTCCAAAACCCAACACTTTCATGCCATTTGGCAACGGAGTTCACTCTTGTCCAGGAAATGAGCTTGCAAAGTTGAACATGCTGATTTTAATTCACCATTTGGTCACCAAATTTAGGTGGGAAGTTGTTGAAAATCAGAATGGAGTTCAATATAGCCCATTTCCTGTCCCTCTTCATGGTCTACCTACAAGATTTTGGAGAAACGATTAG 1446 0.4288 MEISASISTLLLLLSWMCFLLLFLFLFSNLLTKKRDKVENVASKPKLPPGSMGWPYVGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLASPEGARFVLVTHAHLFKPTYPKSKEKLIGPSALFFHQGHYHTLIRKLVQNSLSPDTIRRLIPDIETEVVSSLESWVSAGDVVNAFQEMKKFSFNVGILSVFGNLEGNYRDQLKENYSIVEKGYNSFPTMIRGTSYSKALLARKRIREIISEIISKRKEQRLMEKDLLGHMLNYRDEKGKTLTDEQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYEATKQGKMPLTWGQTRNMPFTHRVILESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPEFHPAPHNFDPSRFEMAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVENQNGVQYSPFPVPLHGLPTRFWRND* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1341 481 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS E-class P450 group I signature 281 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PANTHER CYTOCHROME P450 26 23 478 - -
Amo10g1341 481 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 23 478 - -
Amo10g1341 481 SUPERFAMILY Cytochrome P450 43 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 Pfam Cytochrome P450 48 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 Gene3D Cytochrome P450 37 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Amo10g1341 481 PRINTS P450 superfamily signature 292 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1341 481 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1341 Amo-Chr10 34641691 34645412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1341 20 481 Cytochrome P450 AT3G19270 70.563 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1341 K09843 - gmx:100793868 810.831