Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1311 ATGAACTTCAGGGGCTATGGTGATAACCCCACCAATAATGGTGATAGAATGGGTGGGAAGCCACCACCGGCAAATGTCACTCTGGTGAGGCAGCCTTCGGTTTATTCGCTTACTTTTGACGAGTTCCAGAACACAATAGGGGGGTTTGGGAAGGATTTTGGATCCATGAACATGGATGAGCTCTTGAAGAATATATGGACCGCCGAGGAGTCTCAGGCGTTGGCGTTTTCTTCAGCCGGTATAAATGCCAGCGCCAGTGGTGGTGATTCCAACAACCCGAATGGGAACTTGCAAAGACAGGGCTCTTTGACGCTTCCGAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGATTTGATGAAAGATAGTGGCAGTGGCAGCAGCACTGGAGCCGGAGCCAAAGATGGAAGTAGCAATGGGGTTTCATCTGTGCCTCAAACACAAGGGCAACCAGCATTAGGAGAAATGACATTGGAGGAGTTCTTGGTGAGAGCTGGTGTTGTGAGAGAAGATGCTCCTCAACAAGCTCAACAAATGGCAAGGCCTGATGCTAACAACAATGGTTGGTATGGTGCTGGTGACTATGCTAGATCAAACAATAGCAATGGTTTACTTCTTGGTTTTCAGCAACCAAATAGAAGTAATGGGAACAATCTTGGTAATAACTTGGTTCCCAAGCCTCCTCCTCCTCCGCTGTCGCTAAATTCGAACCATACTCAGCAGCAACAAGCACAGCAGCAGCACCCGCAGCCGCCACCCCTTTTCCCCAAGCCTGCAAATGTGGCTTTTGCTTCTCCTATGCATATGTTGAACAATGCTCAGCTTGCTAGCCCTGGCACAAGGGGTGGGATGATTGGAGTGCCGGAGCGTTCAATGAATGGCGCAGTAGTTCAAAGCAATGGGCTGGCGAGTGTTGGAATTGTTGGTTTAGTCCCGACCAATGTAACAGCTCCGGGTGCCACTCCTGCAAATAAAATGTCACCGGACATGATTGCCAAGAGCAGTGTGGATACTTCTTCAATGTCGTTGTCACCGGTTCCCTATGTAATCAACAGGGGAAGGAAGTGCAGTGCTATAGAGAAAGTTGTGGAGAGGAGACAGAGGAGAATGATCAAAAATAGAGAATCAGCTGCAAGGTCAAGGGCTCGCAAGCAGGCCTATACTTTTGAACTAGAAGCTGAAGTTCAGAAGCTTAAGGAAATAAACAAAGAATTGCAAAAAAAGCAGGAAGAAATGATGGAAATGCAGAAAAATCAGGTAAGTTATCTATTTTGCTTTATATATATTGGGTTGGGACTTGGGACGGAGGGTGACTTCTTGGATTTATATGATTATAATTTATAA 1350 0.4659 MNFRGYGDNPTNNGDRMGGKPPPANVTLVRQPSVYSLTFDEFQNTIGGFGKDFGSMNMDELLKNIWTAEESQALAFSSAGINASASGGDSNNPNGNLQRQGSLTLPRTLSQKTVDEVWRDLMKDSGSGSSTGAGAKDGSSNGVSSVPQTQGQPALGEMTLEEFLVRAGVVREDAPQQAQQMARPDANNNGWYGAGDYARSNNSNGLLLGFQQPNRSNGNNLGNNLVPKPPPPPLSLNSNHTQQQQAQQQHPQPPPLFPKPANVAFASPMHMLNNAQLASPGTRGGMIGVPERSMNGAVVQSNGLASVGIVGLVPTNVTAPGATPANKMSPDMIAKSSVDTSSMSLSPVPYVINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVQKLKEINKELQKKQEEMMEMQKNQVSYLFCFIYIGLGLGTEGDFLDLYDYNL* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1311 449 Pfam bZIP transcription factor 367 419 IPR004827 GO:0003700|GO:0006355
Amo10g1311 449 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 422 IPR043452 GO:0003700|GO:0045893
Amo10g1311 449 MobiDBLite consensus disorder prediction 124 155 - -
Amo10g1311 449 Coils Coil 390 420 - -
Amo10g1311 449 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 370 385 IPR004827 GO:0003700|GO:0006355
Amo10g1311 449 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 365 416 IPR004827 GO:0003700|GO:0006355
Amo10g1311 449 MobiDBLite consensus disorder prediction 122 155 - -
Amo10g1311 449 SMART brlzneu 363 427 IPR004827 GO:0003700|GO:0006355
Amo10g1311 449 MobiDBLite consensus disorder prediction 174 259 - -
Amo10g1311 449 MobiDBLite consensus disorder prediction 85 110 - -
Amo10g1311 449 MobiDBLite consensus disorder prediction 194 224 - -
Amo10g1311 449 CDD bZIP_plant_BZIP46 367 421 - -
Amo10g1311 449 MobiDBLite consensus disorder prediction 1 26 - -
Amo10g1311 449 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 20 422 - -
Amo10g1311 449 Gene3D - 365 421 - -
Amo10g1311 449 SUPERFAMILY Leucine zipper domain 367 418 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1311 Amo-Chr10 32782915 32786617 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1311 1 422 bZIP Transcription Factor Family AT4G34000 43.956 1.82e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo10g1311 bZIP_1 3.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1311 K14432 - gmx:100776600 455.292