Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1308 ATGAACTTCAGGGGCTATGGTGATAACCCCACCAATAATGGTGATAGAATGGGTGGGAAGCCACCACCGGCAAATGTCACTCTGGTGAGGCAGCCTTCGGTTTATTCGCTTACTTTTGACGAGTTCCAGAACACAATAGGGGGGTTTGGGAAGGATTTTGGATCCATGAACATGGATGAGCTCTTGAAGAATATATGGACCGCCGAGGAGTCTCAGGCGTTGGCGTTTTCTTCAGCCGGTATAAATGCCAGCGCCAGTGGTGGTGATTCCAACAACCCGAATGGGAACTTGCAAAGACAGGGCTCTTTGACGCTTCCGAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGATTTGATGAAAGATAGTGGCAGTGGCAGCAGCACTGGAGCCGGAGCCAAAGATGGAAGTAGCAATGGGGTTTCATCTGTGCCTCAAACACAAGGGCAACCAGCATTAGGAGAAATGACATTGGAGGAGTTCTTGGTGAGAGCTGGTGTTGTGAGAGAAGATGCTCCTCAACAAGCTCAACAAATGGCAAGGCCTGATGCTAACAACAATGGTTGGTATGGTGCTGGTGACTATGCTAGATCAAACAATAGCAATGGTTTACTTCTTGGTTTTCAGCAACCAAATAGAAGTAATGGGAACAATCTTGGTAATAACTTGGTTCCCAAGCCTCCTCCTCCTCCGCTGTCGCTAAATTCGAACCATACTCAGCAGCAACAAGCACAGCAGCAGCACCCGCAGCCGCCACCCCTTTTCCCCAAGCCTGCAAATGTGGCTTTTGCTTCTCCTATGCATATGTTGAACAATGCTCAGCTTGCTAGCCCTGGCACAAGGGGTGGGATGATTGGAGTGCCGGAGCGTTCAATGAATGGCGCAGTAGTTCAAAGCAATGGGCTGGCGAGTGTTGGAATTGTTGGTTTAGTCCCGACCAATGTAACAGCTCCGGGTGCCACTCCTGCAAATAAAATGTCACCGGACATGATTGCCAAGAGCAGTGTGGATACTTCTTCAATGTCGTTGTCACCGGTTCCCTATGTAATCAACAGGGGAAGGAAGTGCAGTGCTATAGAGAAAGTTGTGGAGAGGAGACAGAGGAGAATGATCAAAAATAGAGAATCAGCTGCAAGGTCAAGGGCTCGCAAGCAGGCCTATACTTTTGAACTAGAAGCTGAAGTTCAGAAGCTTAAGGAAATAAACAAAGAATTGCAAAAAAAGCAGGAAGAAATGATGGAAATGCAGAAAAATCAGAATATGGATTCTTCATTTTGGCCATTGGGAAATAAAAGACAGTGCTTGAGAAGGACAGTTACAGGTCCATGGTAG 1338 0.4723 MNFRGYGDNPTNNGDRMGGKPPPANVTLVRQPSVYSLTFDEFQNTIGGFGKDFGSMNMDELLKNIWTAEESQALAFSSAGINASASGGDSNNPNGNLQRQGSLTLPRTLSQKTVDEVWRDLMKDSGSGSSTGAGAKDGSSNGVSSVPQTQGQPALGEMTLEEFLVRAGVVREDAPQQAQQMARPDANNNGWYGAGDYARSNNSNGLLLGFQQPNRSNGNNLGNNLVPKPPPPPLSLNSNHTQQQQAQQQHPQPPPLFPKPANVAFASPMHMLNNAQLASPGTRGGMIGVPERSMNGAVVQSNGLASVGIVGLVPTNVTAPGATPANKMSPDMIAKSSVDTSSMSLSPVPYVINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVQKLKEINKELQKKQEEMMEMQKNQNMDSSFWPLGNKRQCLRRTVTGPW* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1308 445 Pfam bZIP transcription factor 367 419 IPR004827 GO:0003700|GO:0006355
Amo10g1308 445 MobiDBLite consensus disorder prediction 124 155 - -
Amo10g1308 445 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 445 IPR043452 GO:0003700|GO:0045893
Amo10g1308 445 Coils Coil 390 420 - -
Amo10g1308 445 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 20 445 - -
Amo10g1308 445 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 370 385 IPR004827 GO:0003700|GO:0006355
Amo10g1308 445 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 365 416 IPR004827 GO:0003700|GO:0006355
Amo10g1308 445 SUPERFAMILY Leucine zipper domain 367 416 IPR046347 GO:0003700|GO:0006355
Amo10g1308 445 MobiDBLite consensus disorder prediction 122 155 - -
Amo10g1308 445 MobiDBLite consensus disorder prediction 174 259 - -
Amo10g1308 445 MobiDBLite consensus disorder prediction 85 110 - -
Amo10g1308 445 MobiDBLite consensus disorder prediction 194 224 - -
Amo10g1308 445 CDD bZIP_plant_BZIP46 367 421 - -
Amo10g1308 445 MobiDBLite consensus disorder prediction 1 26 - -
Amo10g1308 445 Gene3D - 365 422 - -
Amo10g1308 445 SMART brlzneu 363 424 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1308 Amo-Chr10 32650840 32654528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1308 20 445 bZIP Transcription Factor Family AT3G19290 50.557 7.30e-104 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo10g1308 bZIP_1 3.2e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1308 K14432 - gmx:100776600 471.085