Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1275 ATGCAAACAGAATTCCATACTTATGATTTTGCCAGACATTTTGTAAGTGCTTGTACTCGCATTCTTGGGCTTGAAGGGACACATGAAGGAGTAGAAGATCGAGGGAAGCTAACTTGTGTGGCTGCGGTAAAAATTCTTATATCAAAGTGTGTTGATGAAATCTTGAAGATAGATGTTAAACCTGGTCGAAAGAAGAGCACAAAAATAACATTCATAGGGAAAGGAAACCAAGAAGCCGGAAAGGTGCCCGCCGATTTAATCTTGGTGGTGGACGAGAAGCTGCACGCCTTATTCAAAAGAGAGGAGCATTATTTGGTAGTCACAGAGAAGATATTACTTGTAGATGCTCTTACTGGAAAGACTCTCAACTTAACAGCTTTGGATGGAAGAAACCTTAAAATCAAAGTGACAGATATTGTGAAACAGGGCTCCAACTCGTGGTGCCGAATGAAGGTATACAGATTTCAAAGGCTTTCAAAGGCTCAGATTTCAAAAAGTCCTTCTATTTTCCTATCTTTTTCCTCTTGTATCTTCTTTTTCTTGGCATTCCAGTATCTTCTTTAG 564 0.3954 MQTEFHTYDFARHFVSACTRILGLEGTHEGVEDRGKLTCVAAVKILISKCVDEILKIDVKPGRKKSTKITFIGKGNQEAGKVPADLILVVDEKLHALFKREEHYLVVTEKILLVDALTGKTLNLTALDGRNLKIKVTDIVKQGSNSWCRMKVYRFQRLSKAQISKSPSIFLSFSSCIFFFLAFQYLL* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1275 187 SUPERFAMILY HSP40/DnaJ peptide-binding domain 98 144 IPR008971 GO:0006457|GO:0051082
Amo10g1275 187 Gene3D - 22 93 - -
Amo10g1275 187 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 24 145 - -
Amo10g1275 187 Gene3D - 95 156 - -
Amo10g1275 187 Pfam DnaJ C terminal domain 51 143 IPR002939 -
Amo10g1275 187 SUPERFAMILY HSP40/DnaJ peptide-binding domain 45 104 IPR008971 GO:0006457|GO:0051082
Amo10g1275 187 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 24 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1275 Amo-Chr10 29919473 29920881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1275 5 47 Trehalose Biosynthesis Gene Families AT1G78580 81.395 3.95e-17 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1275 K09510 - gmx:100778440 134.035