Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1273 ATGGAAGAAGAGGGGGAAGGGAAGGGGAAGGGAATCCACCGCCGCTATTCCTCGCCGCCGCCGCTGCTCCTCGCCGCCGCCGCTGCTCCTCACCTCCGCCGTCGCTGTTCCTCACTGCCGTCACTGCTCTCCGTCGTTCGGTCGCTGGATCTCGCTGCTGCTCCTCGTCACTCGCCGCTGCTTTCGATTGGGTTTGTTGTCTTCGTAGTCCACTTGGCAATCATTCCTATCACTGAAACTGGGACTAACCCAGCTAGGAGCTTTGGTGTTGCCATCATCTTCAATAGAGACCATGCATGGAATGATCAGTGGATTTTCTGGGTTGAGCTTTTCATTAGAGCTACTCTTGCTACCGTGTACCACCAGATAGTCATCCAATTTTACTTCTGTTTATGCTTCTGA 402 0.5398 MEEEGEGKGKGIHRRYSSPPPLLLAAAAAPHLRRRCSSLPSLLSVVRSLDLAAAPRHSPLLSIGFVVFVVHLAIIPITETGTNPARSFGVAIIFNRDHAWNDQWIFWVELFIRATLATVYHQIVIQFYFCLCF* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1273 133 Pfam Major intrinsic protein 61 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo10g1273 133 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 58 126 IPR034294 -
Amo10g1273 133 SUPERFAMILY Aquaporin-like 56 125 IPR023271 -
Amo10g1273 133 Gene3D Glycerol uptake facilitator protein. 41 128 IPR023271 -
Amo10g1273 133 PANTHER AQUAPORIN PIP1-2-RELATED 58 126 - -
Amo10g1273 133 PRINTS Major intrinsic protein family signature 104 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo10g1273 133 PRINTS Major intrinsic protein family signature 64 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1273 Amo-Chr10 29718865 29719455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1273 1 126 Major Intrinsic Protein MIP AT1G01620 43.262 5.31e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1273 K09872 - ahf:112717392 194.897