Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1272 ATGATAGGAACTTGGTGGAGTTTGGAATTGGAAGTTGTGTTTTTCAACTTTGCTGCTTTCAATAAGGAGAACCTCTGTCTGTATGGATACCCCACGGAACAGTGGGAAGTTAATTTACCCGCTGAAGAAGTTCCTCCTGAACTTCCCGAGCCTGCATTGGGCATAAACTTTGCTAGGGATGGGATGCAAGAGAAGGACTGGCTAACTTTAGTTGCAGTTCACAGTGATGCGTGGCTAATTGCAGTGGCTTTCTACTTTGGAGCAAGATTTGGTTTTGACAGAGCTGACAGGTATATCCTATCATCTCTGTTTTCCTCAACTGGGTACATGCTTTTGGATGCATTTGCCCTATACATGAAACGTCTGTTCACTATGATTAATGATCTGCCAACAATTTTTGAGGTTGTGACTGGAACTGCAAAGAAACAGTCGAAGGAAAAGTCATCAGTTTCAAACCACACCAACAGCAAATCAAAATCTAGTTCAAAAGGGCGAGGATCTGAATCGGTCAAGCAAACAAAGCAAGCAAAGGAAGAGGATGAGGGTGCAGAGGAAGATGAGGAGGAGCACGGGGAGACCCTGTGTGGTGCATGTGGGGAGCTCTATGCAGCTGATGAGTTTTGGATTTGCTGCGACATATTTAGTTTGTGGGTTCCAAACCAGTCTGTATTTGGTATATTTATGTTCCTACAGTCTCTAGTGGCTACATTGGCTTTCATAACAAATTATCTGCCTTTTGTAACTTATGCTCCAGGGAATAAAGATGATATAATGGTTGAGCCTGATGTGGTAGATGTAGCAAACGCACTAGCAAGGCAACATCCATATGAAGAATCTTCTTTGATACTCGCTTTGGATCTGGACGCTATGAATGCACCAGAGTTTCCTGAGTATATCAATGTAGGTTACGAGGGAAGTTATTGTCTATTGCTGAAGCAAAATTTAGACGACACTTACAAGAGCGGAAACGATGGGTGCATGTGGAGCAAAGAGATTTGCACGAGGGGGGAAAATTCTAGCCTGCAAATAAAGCGGGTTTAA 1041 0.4313 MIGTWWSLELEVVFFNFAAFNKENLCLYGYPTEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLTLVAVHSDAWLIAVAFYFGARFGFDRADRYILSSLFSSTGYMLLDAFALYMKRLFTMINDLPTIFEVVTGTAKKQSKEKSSVSNHTNSKSKSSSKGRGSESVKQTKQAKEEDEGAEEDEEEHGETLCGACGELYAADEFWICCDIFSLWVPNQSVFGIFMFLQSLVATLAFITNYLPFVTYAPGNKDDIMVEPDVVDVANALARQHPYEESSLILALDLDAMNAPEFPEYINVGYEGSYCLLLKQNLDDTYKSGNDGCMWSKEICTRGENSSLQIKRV* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1272 346 MobiDBLite consensus disorder prediction 144 169 - -
Amo10g1272 346 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 220 IPR013083 -
Amo10g1272 346 MobiDBLite consensus disorder prediction 144 190 - -
Amo10g1272 346 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 14 103 - -
Amo10g1272 346 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 120 221 - -
Amo10g1272 346 Pfam Alfin 15 103 IPR021998 GO:0006355|GO:0042393
Amo10g1272 346 PANTHER CPG BINDING PROTEIN 14 103 IPR045104 GO:0006355|GO:0042393
Amo10g1272 346 PANTHER CPG BINDING PROTEIN 120 221 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1272 Amo-Chr10 29692916 29699196 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1272 22 223 Alfin-like Transcription Factor Family AT3G42790 59.804 1.53e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1272 - - rcu:8272513 262.307