Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1261 ATGCCTGTGAACAATGAGAGCCAGGAGGGTGTTGGTAATGGTAATAGTAATGATAATGTGGTGAAACCAAAGGGTCCAAGCCCATTCGGCGAAGCGAGACCGAGGGAGGAGGTGCTGGCGGAGAAGGGGCATGATTGGAAGAAGATTGATGAGCAACTTGAGAGCATGAAGATCAAGTCTCCAACCAAGTATGGGGTCCTATCAGAAACACCAATTGCCAAACGAAATCAAGTTACAATTTTGAAGTTAGAATCGGACACCCTTCTGCCTCCTCTTCAAAACCCTGATGACAAAATCGAATCAAAGAACTCACATCCCATTCCCAACCCCATTATCATCAACAAAAAAGAAGGTGAAGTCTTAGAGGTAGTGTCTCAGCTCTCAGAAGAACCATGCAGCATCAGCAGAAGCTTCTCCACCACTACCACAGTTACGGAGAAGAGAGAAGAAGAAGTAACCAGCAAAAGAAACATCAGGGAGGGAACAACAACAATGATAAAGAATCATAAGTGGAATAGCAACAGATTCCCATCGAGGAAGCGCCCTCACGCCTGTGACGACAATGTCGCCTCCGGGAGGGAGCGGAGTGTTGAGGAAGAAGGGGTCAGAGTGGGTATTGGAGAGTGA 627 0.4705 MPVNNESQEGVGNGNSNDNVVKPKGPSPFGEARPREEVLAEKGHDWKKIDEQLESMKIKSPTKYGVLSETPIAKRNQVTILKLESDTLLPPLQNPDDKIESKNSHPIPNPIIINKKEGEVLEVVSQLSEEPCSISRSFSTTTTVTEKREEEVTSKRNIREGTTTMIKNHKWNSNRFPSRKRPHACDDNVASGRERSVEEEGVRVGIGE* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1261 208 MobiDBLite consensus disorder prediction 29 47 - -
Amo10g1261 208 MobiDBLite consensus disorder prediction 143 157 - -
Amo10g1261 208 PANTHER OS05G0503100 PROTEIN-RELATED 66 197 - -
Amo10g1261 208 MobiDBLite consensus disorder prediction 1 47 - -
Amo10g1261 208 MobiDBLite consensus disorder prediction 88 110 - -
Amo10g1261 208 MobiDBLite consensus disorder prediction 179 202 - -
Amo10g1261 208 PANTHER BNAC01G20710D PROTEIN 66 197 - -
Amo10g1261 208 MobiDBLite consensus disorder prediction 1 22 - -
Amo10g1261 208 MobiDBLite consensus disorder prediction 138 157 - -
Amo10g1261 208 MobiDBLite consensus disorder prediction 168 208 - -
Amo10g1261 208 Pfam Plant specific eukaryotic initiation factor 4B 15 62 IPR010433 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1261 Amo-Chr10 28007359 28008247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1261 20 59 Eukaryotic Initiation Factors Gene Family AT4G38710 75.000 3.20e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1261 - - aip:107612529 100.138