Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1224 ATGATTTTCAAGACACTAGAAGAAGCTGAAAAGTTCTACAAATATTATTCCAAACTTGCCAGTTTTTCTATGAAAATAAGAAACACGACTCGAGACAGAGACCAGATTAAGAATCAACTAATTGTATGCACCAGAGAGGAGAGGTGGAAATCCAAGATATCTCCAACTTTGAAGACGAACTCTTCAGCTGGGTTAAATTGTCTGGCAAGAATTTATGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTTCAAAGTTGATTTGAATCACTCACATCCTTGTTGTCCAGACCAGGCTGATATGCTCAAACAACACAGGGAGCTTAGCATGTTTGTGCCATGCACTATTTTCGGTTCACCACACCTTATGGGTTTAGTTTGTTTTGTAGAGCTGTATGAGGATTGGCATATATGCATTCCAGTTTACTTGGATCACCACTTCTGGGTCGGGATGAGAAGTACACAAAAGAGCGAGATCATGCATTCATTTTTCAATAATTTCATCACACGGAATATCTCGTTGAGATAA 531 0.3842 MIFKTLEEAEKFYKYYSKLASFSMKIRNTTRDRDQIKNQLIVCTREERWKSKISPTLKTNSSAGLNCLARIYVHIMKDVGLWTIFKVDLNHSHPCCPDQADMLKQHRELSMFVPCTIFGSPHLMGLVCFVELYEDWHICIPVYLDHHFWVGMRSTQKSEIMHSFFNNFITRNISLR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1224 176 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Amo10g1224 176 PANTHER OS06G0517100 PROTEIN 1 109 - -
Amo10g1224 176 PANTHER OS06G0517100 PROTEIN 128 175 - -
Amo10g1224 176 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 109 IPR031052 GO:0006355
Amo10g1224 176 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 128 175 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1224 Amo-Chr10 27107854 27109268 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g1224 FAR1 3.9e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1224 - - aip:107646405 204.912