Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1186 ATGGCATCAACTGACCAATCACCAACTTTGGAGATATTAGTTCGAACACCSGAAGAGTTATCAATCTGGACTGGACCCCCATTTGCCAATGGTCAACCTGGTGTCAAGCTTGAGAAAGTTAGCTGCGTGAATGCGAAATTCAGCGATGATGGATCGAGACTCATGGTGACGAAATCCAACTCAGTGATTAGCATATATGACTGCAAGAGTGCCAAAGAGATTAGGTCTTTTGAAGTCCCAAACGTCACTTCTGCTATCCTGTCCCCTTGTGGAACCTTTTTGCAAACATTTCAAAAACCTTCGRCACCACAAGAGAAGAATGTCAYGCTGTGGAAAACGGAGAACGGTGATCCTGTTTATCAACACTCCCAAAAGAACCTGACAAAAACAACTTGGCCTGCTATTCAATTCAGCTCCAATGAGGCCACTGCATGCCGGATGGCAACTAATGAGGTGCAGTTTTTTGACACAAGGGATTTCTCTAAGGGGATCATTGATCGATTAAGAGTTCCYGGAGTTTCTGCCATTGAGCTTTCTAGTGCACCTGGGTCTCATGTAGCTGCATATGTGCCAGAATCCAAGGGAATTCCTGCCTGTGTACAAATATTTCCTWGTGGAAATGCTTCTCAAAGTCAAGCTGTTGCACGACGGAGTTTTTTCCGATGTTCAACAACCCAACTTAAATGGAATCATGGTTCTACTGGTCTTTTAGTGCTGGTGCAGTCAGATGTTGACAAAACTAACCAGAGTTACTATGGGGAATCAAAGTTATTCTATCTAACAATAGATGGAAAGCATGAAGGGCTTGTGCCTCTTTCTAAAGAGGGTCCGGTTCACGATGCTCAGTGGTCATATTCTGGCTTGGAATTTGCTGTAGTATATGGTTTTATGCCTGCTAAAGCAACTTTGTTCGACAAGAAGTGCAATCCTCTGCTGGAGCTTGGAACCGGTCCTTATAACACCATTAGATGGAACCCGAAAGGGAAATTTTTATGTTTGGCTGGCTTTGGCAACTTGCCTGGTGATATGGTATTCTGGGATTACGCAGATAAGAAACAACTTGCAGCAACTAAGGCTGAATGGTCTGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACAGCGACAACAGCTCCAAGGCTCCAAGTTGACAATGGGATCAAGATCTTTCACTACAATGGGTCACTGTACTTCACAAAGATGTTTGACAAGTTGTTCCAGGCTGACTGGAAACCGGAGCCAGCAGATAAGTTTGGTGACATCACCGAATTAATCAAGTCTCTCAATTTGGGTAAAGTCGAAGATAAAAAGCCATCAGGTCCAGGACCAAAATCGKCTCAGGCTTCTAACAAACTCTCTTCTACGAACCCCCCTGCACAAAAGCCTGCCGCATATCGCCCACCACATGCTAAGAACGCTGCTGCAGTTCAGGCTGAGTTGCTTGGAATAGGAGAGAGCAGCCCCGCAGGATCAATGAGCAAGAATGCATTAAGAAACAAGAAGAAGAGGGAGAAGCAAAAGGAGAAAAAGGCTGCTTCGGATGCCAATTCATAG 1560 0.4462 MASTDQSPTLEILVRTPEELSIWTGPPFANGQPGVKLEKVSCVNAKFSDDGSRLMVTKSNSVISIYDCKSAKEIRSFEVPNVTSAILSPCGTFLQTFQKPSXPQEKNVXLWKTENGDPVYQHSQKNLTKTTWPAIQFSSNEATACRMATNEVQFFDTRDFSKGIIDRLRVPGVSAIELSSAPGSHVAAYVPESKGIPACVQIFPXGNASQSQAVARRSFFRCSTTQLKWNHGSTGLLVLVQSDVDKTNQSYYGESKLFYLTIDGKHEGLVPLSKEGPVHDAQWSYSGLEFAVVYGFMPAKATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYADKKQLAATKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFTKMFDKLFQADWKPEPADKFGDITELIKSLNLGKVEDKKPSGPGPKSXQASNKLSSTNPPAQKPAAYRPPHAKNAAAVQAELLGIGESSPAGSMSKNALRNKKKREKQKEKKAASDANS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1186 519 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 10 517 IPR011387 GO:0003743|GO:0006413
Amo10g1186 519 MobiDBLite consensus disorder prediction 434 519 - -
Amo10g1186 519 Gene3D - 31 394 IPR015943 GO:0005515
Amo10g1186 519 Coils Coil 496 516 - -
Amo10g1186 519 PIRSF Transl_init_eIF2A 4 519 IPR011387 GO:0003743|GO:0006413
Amo10g1186 519 SUPERFAMILY DPP6 N-terminal domain-like 42 395 - -
Amo10g1186 519 MobiDBLite consensus disorder prediction 445 462 - -
Amo10g1186 519 Pfam Eukaryotic translation initiation factor eIF2A 217 410 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1186 Amo-Chr10 26005656 26011078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1186 131 417 Eukaryotic Initiation Factors Gene Family AT5G25780 23.473 1.95e-20 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1186 K15026 - gmx:100811589 874.774