Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1156 ATGGCGTGGACAGCTCCAACAGGTGACAAGTGTGTGATTAAAGTAGCAGATGTGACCTGCTATAGGAAAGGCGTCCTCTCAATTCAGGAAGTGCAACTCCCTGCACGTGATCAGGAAACATTATCAGCTTGTGTCCTGCCGCGCCGTCCGTCGCTCTCGACGCCTCTGCACTGTCCGTTATTCTCAGCGCCTCCCCACCGTCCATTGTTCTCGGCGCTTCCGCGGCCTCCTCCTTCCCCGTGTCTCAAACCCAGCCACTCTCTTGTAGCTCGGGACATCTGGAAAAGAAGGAATAACAGTGGTTGTCGTCTGGTGGGCATCCTGCTCGGCATTGTCTACTCGCTGTCACGCTCAGCTGCTCAAATCGAAGGTCGGTGCACATTGCTAGTGCTTGTTCTTCTTTTTTTTTTGTGCTCTATGGAATACACTGGTCATAGCAAGAAATTCTGCATGGAGGATGAAAGCGAATGTTTTGGCGAAGTAGTCAGTTCAGATGCTGATGAATTTGATGTTGAGCAATTGGATCCAAGTGGGCAGGATGACCTGTCGGATTATGGAGATGTATTTGGTCTTACTGCAGCTGAAATAGAGAACAAGGTTTTCAGAACCGAGGAGCATGCTTATGAATTCTATATGAGGTTTGGGAAGTGCCATGGGTTTGGTGTACGCAAGGGAGACTATGGGAAGGATGATGACGGAAATGTAATTAGGAGGAGATTCTTTTGCAACAGAGTTGGGTTAAGGGATGAAAAGCACTATAATAGATTAGACAGAAAAAGATGTCATAAGCCTGAGACACGAACGAACTGCCAGGCTAAGTTGTCGATATATCTTGACAAAGAAAGTTCGAACTGGAAGGTCCAGAAAGTCATCCTCGAGCACAACCATGACTTAGTAGCTAGGTGTATGGTACACTTGATTCCAAAGTTCCGTCGGGTTTCAGGTGCGGCAAAGGATCAGCTAGATGTCCTTCGTGAATATCGTAACAATGAGATGGTTGCACAGTTCAACTCCATTTATAATGTCCCTGTTATGACGACGTGCCTTGATCCAATCGAAAAATGTGCTGCCATGGTATATACGCGGACCATTTTCACCAACGTGAAAAAGGAGATAGATGCGGTTGGAGCTCTAAACTTTGTTAGTAAGCAGAGGGTGTCGACGACGGTAGTGTACACAATGGAGGAGTATGGTAATCCCGGGAAGCCAGTGGTTACTTTGATCGACATGAACACGACAAAGTTGGAGTGTAGATGTAACTTTTGTGCTAGAGAGGGGATACCTTGTCGACATATGTTTTTTGTGATGAAGCATGAGCACTTGAAGACAATTCCTCATCGGTTAATTTTGAAACGATGGCGTAAGGACGCTAAGGCCGTTGAAGACTACTCGGAGAAGAAGGACGTAGCCGATGATCGGGGATTCTTGCTTCGGCATGGTGCCTTACATGCGGCAGCTCAATGGTTGTTGTTTCTTGGTGCGCAGAGCCATGAGCTATTTAATGTAGCGATGAGGGGAATTCGTAGCATGTGTGTTGACATGGAGGGATTGCGCGGGGATGGCTATGATCAGACCAACACAGATCCTGAAGTTGGTGTGCGTGATCCAGCTATCGTGCGGACGAAAGGGGCTCCTAGTACCCGGGGGGTAAGGGGTAAAAAAAGAAGATGCACGACTTGCAGGCGGACTGGACACACCAAGCGAAGGTGCGCTGAAGGGTTCAAAAAAGCGTCTGTAAAGCTGCACGACTTGGAAGAGGATGCTGATGTGATACCACACAAAGAAAAGGTTGTTCTAAACATGTTCATTTTGTTGTGCTGA 1821 0.475 MAWTAPTGDKCVIKVADVTCYRKGVLSIQEVQLPARDQETLSACVLPRRPSLSTPLHCPLFSAPPHRPLFSALPRPPPSPCLKPSHSLVARDIWKRRNNSGCRLVGILLGIVYSLSRSAAQIEGRCTLLVLVLLFFLCSMEYTGHSKKFCMEDESECFGEVVSSDADEFDVEQLDPSGQDDLSDYGDVFGLTAAEIENKVFRTEEHAYEFYMRFGKCHGFGVRKGDYGKDDDGNVIRRRFFCNRVGLRDEKHYNRLDRKRCHKPETRTNCQAKLSIYLDKESSNWKVQKVILEHNHDLVARCMVHLIPKFRRVSGAAKDQLDVLREYRNNEMVAQFNSIYNVPVMTTCLDPIEKCAAMVYTRTIFTNVKKEIDAVGALNFVSKQRVSTTVVYTMEEYGNPGKPVVTLIDMNTTKLECRCNFCAREGIPCRHMFFVMKHEHLKTIPHRLILKRWRKDAKAVEDYSEKKDVADDRGFLLRHGALHAAAQWLLFLGAQSHELFNVAMRGIRSMCVDMEGLRGDGYDQTNTDPEVGVRDPAIVRTKGAPSTRGVRGKKRRCTTCRRTGHTKRRCAEGFKKASVKLHDLEEDADVIPHKEKVVLNMFILLC* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1156 606 Pfam FAR1 DNA-binding domain 209 299 IPR004330 -
Amo10g1156 606 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 193 322 IPR031052 GO:0006355
Amo10g1156 606 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 325 459 IPR031052 GO:0006355
Amo10g1156 606 PANTHER OS12G0160900 PROTEIN 193 322 - -
Amo10g1156 606 PANTHER OS12G0160900 PROTEIN 325 459 - -
Amo10g1156 606 ProSiteProfiles Zinc finger SWIM-type profile. 402 440 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1156 Amo-Chr10 24110906 24116446 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g1156 FAR1 1.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1156 - - adu:110276719 534.258