Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1101 AAGCCCCTTCCACCCCACCTCAAGTATGCTTACCTTGAGGATAATCAGAAGCTCCCAATTATCATTGCAAGGGAACTCACATCCCAAAAAGAGGAGCAGTTGCTTAGTGCATATGTTGATTTTTGGGAGATGGAGCCGTCAGATAGCAATTTTTTTGGAACAGACTGTGACGAGGAGTTCCCAAGAGGAGACGATCTAGATTTTTTAGACGACGATTCAGAGGTGGATGAAGATAGACCTCAAGATAAGAGAATAGCATTGCTGTCACGAGAAGATATCATGCAACTTCAGTTTACAGATGAGGAAGTTGTTTATCGATTCTATAAGACTTATGCAATGATGCACGGTTTCACTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTGTGTAATTGTGCGCCAAATTGTTTGCAATCGGGCAGGCTCAAGAAAGGAAGAGGTTAAAAAGGACGAAAGAATCAGGGACCATCGATCCCTAACTCGAAGTTGTTGCCGGGTGAGAATTCATGTAAGACTCGATAGAAAAATTCATAAATGA 543 0.4273 KPLPPHLKYAYLEDNQKLPIIIARELTSQKEEQLLSAYVDFWEMEPSDSNFFGTDCDEEFPRGDDLDFLDDDSEVDEDRPQDKRIALLSREDIMQLQFTDEEVVYRFYKTYAMMHGFTVRLDEVRRDSDGCVIVRQIVCNRAGSRKEEVKKDERIRDHRSLTRSCCRVRIHVRLDRKIHK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1101 180 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 174 - -
Amo10g1101 180 Pfam FAR1 DNA-binding domain 106 176 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1101 Amo-Chr10 23057365 23059708 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g1101 FAR1 6.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1101 - - aip:107620373 226.098