Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1084 CATCCTCTCTACCCACCAAAACATACCCTTAAGAATTCAAGTAAATACTATCACCACCTTCCAGCTGAAGCACTCTCTCATTTTGCATTGGTGAAAGACATCAACATGGCATTTGTGATAGACTTGAACACGCAGCCATCGTTAGAAGAAATTCACTCATTTGATACCCATATTGATATGGACGATACAAATATTTGCAATAGTTCAAGCAATGATATGGACGATACAAATATTTGTAATAGTTCAAGCAATTCTGCTACAGAAACTGAGTGCACGACTGAGGTCATAATTCATCCCACCATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCGAAGAAGCACGCCAATTTTACTACAACTATGCCAATAAAGTGGGATTCGAGCCTCATATAAGAAACACTAACTTCGACAAGAATGGAAGGACACCCATTAACCAATCCATACAGTGCAATAGAGATGGATACCGAACAAAGAAGAATCTGCTTGGAAAATGGAGACTGTCGAAAGTAGAATTGGCTCACACGCATCGGTGTGATCCCAGTTTGTCATGGATGTTCAAGAAAAATAGAGAACTCTCCATGCACGTTAAGGATGTCATTGAGCGCAACGACCAGGCTGATAAGGAACAGCAGGAGTTGGAATGCGATGCAGCAGATAATAGGGGCCTGATCCCATGTGCCTCGAACTCTCCTATTGAGAAGCAGTTCCAATATGAGTACACGAACTGCATATTTCGCGATTTTCAAGCCGAATTTGTCAAAAAGTGCGACTACAACCTGTCTCCAAGGGTAGTGAAGGACAACCAATACTTCTATGAAGTGACTCAACAGAAGATAGTTAAATGGATGTCTATTTACAGCGAGTATGAGGTTGTGTTTTGTCCTATCTCGCACCAAGTTAGGGTTGACAAGGTGAACTCGTCGTATATACTTTCTCGGTGGAGCAAGAATGTTTATCGTAAGCACACCCATATTAGAAGTAGTCACGACTCACGGCGCTTTGATGAAAGCATGAATATATTTAGGGGACTGTGTGTTGACTTCTACAATGTGGCCCAGGACTTTGTGCATGATAAGGAGGAGGCTGATATATTGCGGTCCGCTTTTGCAAGTGCCAAAGTGGCACTTAGCAAACATCGGGCAAAACATTCAGAAAGCATGGGGCGTCCAAGCTTCAAGAGACTGGAGGCAGATGTGGACCGGAAAATTAAGAATGGTACTAAGAAACGTCGAGCTAGTTGTAAACATACAAAGGAAGTTGCAGCTGTTGAAGGAGACAAACATTCAAACAAGGCCACCGAGAGACGCATTACTGCTAGCAAACACCCTAAGGTTTATTTTACTGTTTATTGCTAG 1371 0.4245 HPLYPPKHTLKNSSKYYHHLPAEALSHFALVKDINMAFVIDLNTQPSLEEIHSFDTHIDMDDTNICNSSSNDMDDTNICNSSSNSATETECTTEVIIHPTISDEEIPKVGMLFGTLEEARQFYYNYANKVGFEPHIRNTNFDKNGRTPINQSIQCNRDGYRTKKNLLGKWRLSKVELAHTHRCDPSLSWMFKKNRELSMHVKDVIERNDQADKEQQELECDAADNRGLIPCASNSPIEKQFQYEYTNCIFRDFQAEFVKKCDYNLSPRVVKDNQYFYEVTQQKIVKWMSIYSEYEVVFCPISHQVRVDKVNSSYILSRWSKNVYRKHTHIRSSHDSRRFDESMNIFRGLCVDFYNVAQDFVHDKEEADILRSAFASAKVALSKHRAKHSESMGRPSFKRLEADVDRKIKNGTKKRRASCKHTKEVAAVEGDKHSNKATERRITASKHPKVYFTVYC* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1084 456 Coils Coil 201 221 - -
Amo10g1084 456 PANTHER OS03G0843700 PROTEIN 215 343 - -
Amo10g1084 456 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 215 343 IPR031052 GO:0006355
Amo10g1084 456 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 84 206 IPR031052 GO:0006355
Amo10g1084 456 PANTHER OS03G0843700 PROTEIN 84 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1084 Amo-Chr10 21759746 21765047 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g1084 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1084 - - ahf:112774709 428.713