Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1071 ATGTCTTCTTTCACATCACTACTCTTCTCTTGTGCAGCCATCGCCGCCTTCCTCATCCTCCTCCGGCGGTGGCGCTACCGCCGCCTCCGCCTCCCTCCGGGGAGCCTTGGCCTCCCCTTCATCGGCGAGACTCTACAGCTCATATCAGCATACAAGAGCGACAACCCAGAGCCCTTCATGGATCGAAGATTGAACCGGTACGGTCTAGTCTTCACGACTCACGTGTTCGGAGAACCGACCGTGTTTTCGGCGGAACCGGAAATGAACCGGTTCGTTCTTGCGAACGAAGGGAAGCTCTTCGAGTGCAGTTACCCCGGTTCGATATCGAACCTTTTGGGAAAGCACTCGTTGTTGCTGATGAAGGGGAATCTTCACAAGAAGATGCACTCACTAACGATGAGTTTCGCGAATTCTTCGATCATAAAGGATCATCTTTTGGTTGATGTGGACCGGCTCATACGGCTCAACTTGGATTCTTGGTCCGACCGGGTTCTTCTCATGGAAGAGGCCAAGAAGATAACATTTGAGTTGACAGTGAAACAACTAATGAGCTTTGATCCAGATGAATGGACTGAGAATCTAAGGAAAGAGTACGTTCTTGTGATTGAAGGATTCTTCACTCTTCCATTCCCTCTCTTCTCCCCTACCTACCGTAGGGCCATCAAGGCAAGAACGAAAGTGGCGGAGGCACTAACATTGGTAGTGAGGGAGAGAAGAAAAGGGAGTGAAAGTGATGGGAACAGAAAGAAGGACATGCTTGGGGCACTGTTGGCCTCCGGGGAGCAATTTTCCGACGAGGAAATAGTCGATTTTATGTTGGCTTTGCTCGTCGCCGGCTACGAAACCACCTCTACCATCATGACTCTTGCCGTCAAGTTCCTCACTGAGACTCCCCTTGCCTTGGCTCAGCTCAAGGAAGAGCATGACCAAATCAGATCAAAGAGTAAAACAGGTGCACCACTTGAATGGTCAGATTACAAATCAATGATCTTTACTCAATGCGTTGTGAATGAGACCTTAAGGATGGCGAACATAATTGGTGGAATATTCCGGAGAGCAACCACAGACATAAATATAAATGGTTACACAATTCCAAAGGGATGGAAGGTATTTGCATCATTTCGTGCTGTACATCTTAACCCAAACCATTTCAAAGATGCACGCAGCTTCAATCCATGGAGATGGCAGAATAACTCAGAGGCAACGATCCCTGTAAATGTATACACACCATTTGGAGGAGGGCCAAGGCTGTGCCCTGGCTATGAGCTTGCCAGGGTTGTTCTTTCCGTCTTCCTTCACCGCTTCATCACCATCTTCAGTTGGGTACCTGCTGAGGAAGATAGGTTGGTGTTCTTCCCTACGACTAGGACACAGAAGAGGTATCCCATCATAGTAAAGCGTAGGGAGGAGTCAAGTCCTTGTATATAG 1428 0.486 MSSFTSLLFSCAAIAAFLILLRRWRYRRLRLPPGSLGLPFIGETLQLISAYKSDNPEPFMDRRLNRYGLVFTTHVFGEPTVFSAEPEMNRFVLANEGKLFECSYPGSISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLVDVDRLIRLNLDSWSDRVLLMEEAKKITFELTVKQLMSFDPDEWTENLRKEYVLVIEGFFTLPFPLFSPTYRRAIKARTKVAEALTLVVRERRKGSESDGNRKKDMLGALLASGEQFSDEEIVDFMLALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHDQIRSKSKTGAPLEWSDYKSMIFTQCVVNETLRMANIIGGIFRRATTDININGYTIPKGWKVFASFRAVHLNPNHFKDARSFNPWRWQNNSEATIPVNVYTPFGGGPRLCPGYELARVVLSVFLHRFITIFSWVPAEEDRLVFFPTTRTQKRYPIIVKRREESSPCI* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1071 475 Pfam Cytochrome P450 32 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 SUPERFAMILY Cytochrome P450 23 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PANTHER CYTOCHROME P450 26 12 467 - -
Amo10g1071 475 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g1071 475 PANTHER CYTOCHROME P450 90A1 12 467 - -
Amo10g1071 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Amo10g1071 475 Gene3D Cytochrome P450 22 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1071 Amo-Chr10 21193602 21201920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1071 120 469 Cytochrome P450 AT5G05690 80.000 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1071 K09588 - gmx:100775886 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1071 10 21193602 21201920 Amo17g0292 17 4767290 4772891 PCT
Amo10g1071 10 21193602 21201920 Amo07g0502 07 5683997 5689313 PCT
Amo17g0292 17 4767290 4772891 Amo10g1071 10 21193602 21201920 PCT
Amo07g0502 07 5683997 5689313 Amo10g1071 10 21193602 21201920 PCT