Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1034 ATGGATCATTCAAATGAAGATTGTCAGCTGAATCCAGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTCGGTTGTTGATGACGAGCTTGTTCCGAAGGTCGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAGGTTTCTCTACAAGAGTTCGGTGCACAAATAGGAAGGGAAACGAGATTAAGAATCAACTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGACCGAGAAGACCAATCCGACAGCCAGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGCAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTCGTCGTACGATAGAGAATAATGAGGAGGCCGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGTACATCACCCGGAACAGCTCGCTTATTCAGTTCGTCAAACAATACGATAATTGCCTCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACCGTGTGCAACAAAATCCATCCATTGA 681 0.442 MDHSNEDCQLNPGEVDYEFESNEVPEPLSVVDDELVPKVGMTFTTLEDAGKFYRNYAKAAGFSTRVRCTNRKGNEIKNQLITCSREGKWKSKISPTEKTNPTASLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSIRRTIENNEEAGMRSTQRSESMHSFFNKYITRNSSLIQFVKQYDNCLGSREQAERESDAADFHTVIPCATKSIH* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1034 226 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 158 IPR031052 GO:0006355
Amo10g1034 226 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 163 220 IPR031052 GO:0006355
Amo10g1034 226 PANTHER OS06G0517100 PROTEIN 39 158 - -
Amo10g1034 226 Pfam FAR1 DNA-binding domain 51 136 IPR004330 -
Amo10g1034 226 PANTHER OS06G0517100 PROTEIN 163 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1034 Amo-Chr10 19796770 19798934 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g1034 FAR1 1.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1034 - - adu:110280446 326.25