Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1025 CGTCGCGTCTTGCCGCCAAGGGTTCTGTCGCCGTTGCGCCTTACCTCTGTCACTACTAATCCACCGCCACTACTACCAGGTCCCGTTGCCATCATCATCGCAGACAGAAAAGGGGGAAAACGAACAGAATGTGAGGGGGAGGAGGAGTTCTCATCGTTGTTGTACGCCCAATTATCGCTGCTGCTTCCAATCCCACCGTTGCTGTTGCGCCGCCGCCTCCGGAGTTCGTCGCCATCGCCAAGGTCCGTTGTGAAGAGTAACGCGAATGGAAAAGAAAACAAGAAAGCTGCTAATAGGGATTTGGGAAAATGGCTCTGTTTTGCCTCTGTCTCTAGGTTTCACAAGTTGCCAGAGTCCTCAGCTTTGATAGGTAAAGCAAATTTTTTAACTGGTTTCTTGTTGCCTTTGGGTTATTTCTGCAGACTGCTCATATTTGATAACATAGAGAATGGAAGCTTAAAAGAGCATCTCAATGATCCCTTGAAGACTCCCTTAAATTGGAGGATGAGGTTGCAGATTGCTAATGAAGTTGTAGCAGCACTACTGCAGAAGTACTTGTTTCTTTTTAATGATCCACCGGCATATCATGTCTCCATCAGCTCAAGAAATATTATGTTAGATGAGAACTTTGTAGCTAAATTATTAGATTTTGTCCTTCTTACACCCAGTGCAAACTCTATCATGATGCCGAATTCAGGAGGTCCTTATCTCTCAACAGAAAACAAAACAGGTTATATACATTAG 744 0.4476 RRVLPPRVLSPLRLTSVTTNPPPLLPGPVAIIIADRKGGKRTECEGEEEFSSLLYAQLSLLLPIPPLLLRRRLRSSSPSPRSVVKSNANGKENKKAANRDLGKWLCFASVSRFHKLPESSALIGKANFLTGFLLPLGYFCRLLIFDNIENGSLKEHLNDPLKTPLNWRMRLQIANEVVAALLQKYLFLFNDPPAYHVSISSRNIMLDENFVAKLLDFVLLTPSANSIMMPNSGGPYLSTENKTGYIH* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1025 247 PANTHER OS01G0253100 PROTEIN 140 230 IPR045271 GO:0004714|GO:0006468
Amo10g1025 247 Gene3D Transferase(Phosphotransferase) domain 1 131 243 - -
Amo10g1025 247 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 140 230 - -
Amo10g1025 247 SUPERFAMILY Protein kinase-like (PK-like) 140 217 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1025 Amo-Chr10 19087680 19089217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1025 133 225 Receptor kinase-like Gene Family AT3G19300 46.939 4.78e-20 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Amo10g1025 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1025 - - aip:107636928 298.516