Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1022 ATGGCAAAAGAAGGAGGAACCATCGTATCTGGTGAACATGGTATTACCACAATCTGTGTGCCTAGGAGGGATAGTTACTTGCATTCTGTAGGCATGTGGGTTGGAGATAATCCATTTGATTTTGTTGTTCCTGTCACGTTGTTCCAAATCATTATCTTCATTATAGCTTCCCGAATATTGTACATTGTTCTCAGGCCTCTAAGCACACCCAAATTCGTCTGCTATGTTCTGGGTGGCATTCTGGTAGGACCATCAATTTTGGGCAACCATTTATTTGAAGTTGTATATCCTCCTATACAATCTCCAATTTTATTCTTGTTGGGAAGGTTAGGTGCTGCATATAGTGTGTTCTTCATCACACTAAAAATGGACATAGTCCCAACTATAAAAGCAGCCAAAAAATATTGGAAATTAGGTTTCATGCCGTTCTTAAGTTCTTTTCTTGTTATGTACACCCTAGCACACTATACCAACTTGGAATATAGAGGTAAATTAAAGCAACCAAGCATCCCTTGTTGGACTAGTTTTCCCGTTGTCTCAGATTTCTTGATGGAACTCAACCTTATAACTATGGAAATAGGTCAGATCGCTCTGTCTACGGCTATCGTGTCCGAAATGTGTCAGTGGATTGTGTTGATAACCTACGTGTTAGCAACAAACACACTAAACTTCTCATTTGCAAACCTAAGTTTCCTTGTGGCCTTCTTGATGTTCTTGTGCTTTGTTGTAAGACCAATAATGAAGGTGATAATTAAAAGAACACCAAAGGGGGAACCGGTAAAACAAGGTTATGTTACTATGGTCCTTCTAGGTGTTATTGGCATGGCAACAATTAGTGATATCATTGGAATAACGTTCATAATGGGACCCACACTTTATGGTTTGTTTATCCCTAATGGTCCCCCTTTGGCAACAACAATAGTGGAGAGGTCTGAAGTTGTTATATCGGAACTTATTATGCCTTTTTTCTATTTGACGTTAGGCACAACCACAAAAATAAGTAGCATTACTGATGAATATTGGTACCAAAATTTGATGGTTGAGTTTGTTGTTTTGTGTGGGGTCATGACAAAAGTGCTTGTAACTATGGTCCTTGGCATGGCGCATAATTTAAGATTAAAACATGGGTTTATTCTTGGCCTTATGATGAGCATTGAAGGCATACTTGACCTAATCTTATTTCATGGAATGATGAGAGCACAGATTTTTGAAGATTACATATTTGTTATACTCGAGCTTCATGCTTTGTTGATAACCGCTATTTCTGCACCATTGATAAAGTTCTTATACAAACATCATCCTCGTTTGTCAAAAGAACCAAGTGCACATGATGCAAGAGTGAGAACAATCCAAAGAACTTCTTTAACATCAGAATTTAGCATCATTTCTTGCGTACACAAAGACACAGATGTTCCTAGCATGATTGCGCTTCTAGAATCCTTTAACACCTACCAAGAGAGTCCTCTGTGTGTCCACGTCATACACCTTGTTGAGCTCTTGGGAAAAAGTACACCCATTCTTCTTCCTTTGAAAAAGAAAAACAAGAAGGTCAAATCATCCGCCATTTATCTTGAAACCAACCAGATCATGCGAGCATTTGAGAATTACTCGCAAAACTCTGCAGGTGCGGTAACCGTGCTTTCCTATGTCAACATTGCGCCTTACAAGATCATGCATGAGTCTGTTTGTAATCTTGCTGACCACAACCGGATATCTTTGATTCTCATCCCTTTCTATGAATACAACCAAAGCATTAATAGCCATGACGGAACCTTTATTCGCGACCTTAACACCTCCTTTCAACTAAATGCAAGATGCACAATAGGCATCCTAGTGGACAGATATTCAACATTGGCTTTGAATGCATCGTTATCATGTTTTCATGTGGCTATCTTCTTCCTTGGTGGGCAAGACGATAGAGAAGCACTAGCATTAGGTATTAGAATGTTGGACCGTATAACCATAAAGGTCACACTAATATTGGACGAATGCTTGGTAGATGAATTCAAGGGGAAGAAGGTTGTCCACAACAATGCTAATTTTCATGAAATTTTGGTAGAAGATTCCATAGGTGTTTTAGAAGCGATTCGGGGCATGGAGATGGAGATATATGACCTTGTCATTGTCGGAAAGAGGCATCAATCTATGAGTATTACGGATGAAGAAATGATGGATTTTATGGACAACGCGGATCAATTAGGAGTTATTGGCGACATGTTAGCGTCCACAGAGTTTTATGGTGGGAAAATTTCACTCTTGGTGATGCAATGTGGAGGGAGGAAGGTTTTGGAAAAGAAAACCTCTACTAATCGAGGTTTAAAACTTTAA 2328 0.3913 MAKEGGTIVSGEHGITTICVPRRDSYLHSVGMWVGDNPFDFVVPVTLFQIIIFIIASRILYIVLRPLSTPKFVCYVLGGILVGPSILGNHLFEVVYPPIQSPILFLLGRLGAAYSVFFITLKMDIVPTIKAAKKYWKLGFMPFLSSFLVMYTLAHYTNLEYRGKLKQPSIPCWTSFPVVSDFLMELNLITMEIGQIALSTAIVSEMCQWIVLITYVLATNTLNFSFANLSFLVAFLMFLCFVVRPIMKVIIKRTPKGEPVKQGYVTMVLLGVIGMATISDIIGITFIMGPTLYGLFIPNGPPLATTIVERSEVVISELIMPFFYLTLGTTTKISSITDEYWYQNLMVEFVVLCGVMTKVLVTMVLGMAHNLRLKHGFILGLMMSIEGILDLILFHGMMRAQIFEDYIFVILELHALLITAISAPLIKFLYKHHPRLSKEPSAHDARVRTIQRTSLTSEFSIISCVHKDTDVPSMIALLESFNTYQESPLCVHVIHLVELLGKSTPILLPLKKKNKKVKSSAIYLETNQIMRAFENYSQNSAGAVTVLSYVNIAPYKIMHESVCNLADHNRISLILIPFYEYNQSINSHDGTFIRDLNTSFQLNARCTIGILVDRYSTLALNASLSCFHVAIFFLGGQDDREALALGIRMLDRITIKVTLILDECLVDEFKGKKVVHNNANFHEILVEDSIGVLEAIRGMEMEIYDLVIVGKRHQSMSITDEEMMDFMDNADQLGVIGDMLASTEFYGGKISLLVMQCGGRKVLEKKTSTNRGLKL* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1022 775 Pfam Sodium/hydrogen exchanger family 51 421 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo10g1022 775 Gene3D - 45 438 IPR038770 -
Amo10g1022 775 PANTHER CATION/H+ EXCHANGER 3 16 761 - -
Amo10g1022 775 PANTHER CATION/H + ANTIPORTER 16 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1022 Amo-Chr10 19041244 19045209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1022 25 756 Antiporter Super Family AT2G13620 30.524 2.55e-112 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1022 - - aip:110268392 1379.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1343 20 28675148 28679320 Amo10g1022 10 19041244 19045209 hybridization