Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1018 ATGGGGAGAAACAGGCTCATTCCGTCGGATTTTGACAATGATCGCATATTCTATCTTCATGTAGACCCTGTTGCTGTTACCCATGAGTTACCATCCTTGTTCTATAGAAAATATAACCATCTCTTTCGTGATAGACTGATTGTTATAGACGCTAACGACAATCAAATTGAGCTATCATTGGGCAGATGTTTCTCTACTGGGTATATTATTAATGGATTTCATAACTTGGTGGGGGTTAAGGATAGCTGTATGACCACTAAAGAATTCTCATGTCTCCCAAGCATTTCACTCATCGCAATCAAACCACATGGTCCTCCTAATAAAAACGAACCACTGGAAACTCTTTGTTATCCACTTGCGGTGTTCCCTTTGAGTGTGTCAACTTGCTACACACCTGAGGTACAAACTGTTTATATGCAAGATGTTATAAGGGTCAATTTTCAAAGAGATGATGGCTTTATGAGTGTTCCATCTTTGAATGAATCTTATGTTCTTTCTGATCCTAGCCACCCCTGCATTATCAATTCAAATGGTATGTCTAACCAAGGCAATGATTTTATGGAGAATCAACATCAACTTCTTGATCAGACGTTGCTCAATTGCAATACTCTTAACAATTATATTTCTTCTGCAAGCCATCCAACCATTCAAACCGAAAAAAAACATGCAGGCAACAATATCATGTCACCGTTAATCAGCTCAGGCCCTGGTACGGCCATTCAAGGAGCCCAGCCATTGACTTGCCTGAAACTTCTCACATCCACCCAAGTCCAAAATAGCGCAGTGGTAATACCGCTTAGATTTGCTGAGAGTGCATTCCCCAACAGGCATAACCATGTTAACGTGATACTGAACAATGGCTCTTGCTACAGAATGGGGTTGAGATGGAGCAAGAAAAAGAAGGTCCAATTATATCTGATGCATGGATGGAAGACATTTGCTAAGTATAATGGGTTTAGAGCCTGCACCGTTCTAGAGTTCTCTATTTTACCATCTGATGAGACCATCTTGCATGTCAAAATTCTGAAGATCTGA 1035 0.4039 MGRNRLIPSDFDNDRIFYLHVDPVAVTHELPSLFYRKYNHLFRDRLIVIDANDNQIELSLGRCFSTGYIINGFHNLVGVKDSCMTTKEFSCLPSISLIAIKPHGPPNKNEPLETLCYPLAVFPLSVSTCYTPEVQTVYMQDVIRVNFQRDDGFMSVPSLNESYVLSDPSHPCIINSNGMSNQGNDFMENQHQLLDQTLLNCNTLNNYISSASHPTIQTEKKHAGNNIMSPLISSGPGTAIQGAQPLTCLKLLTSTQVQNSAVVIPLRFAESAFPNRHNHVNVILNNGSCYRMGLRWSKKKKVQLYLMHGWKTFAKYNGFRACTVLEFSILPSDETILHVKILKI* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1018 344 Pfam B3 DNA binding domain 250 341 IPR003340 GO:0003677
Amo10g1018 344 Gene3D - 238 344 IPR015300 -
Amo10g1018 344 CDD B3_DNA 245 343 IPR003340 GO:0003677
Amo10g1018 344 ProSiteProfiles B3 DNA-binding domain profile. 247 344 IPR003340 GO:0003677
Amo10g1018 344 SUPERFAMILY DNA-binding pseudobarrel domain 247 341 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1018 Amo-Chr10 18990476 18991886 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Amo10g1018 B3 1.1e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1018 - - adu:110277091 422.935