Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g1015 ATGACTGTCGCACCACCCAGCTTGCCTTCATCTAACATTCACACCCAACCCTCTCTATGTGGCACCCAACGGTCTCTCGCACCATCAACGCTGTTCTATCCACGCACCGAGGAATTGGCGCTGCTCCATCCACGCACCCTTGTTGGATTTGAAACCTCCATCGACGAGGAGAAGAGGAAGAAGAAAACCTTAGAGGAGAAGAGGAAGAGGAAAACCTCCTCGTTGGATTCCTTTTACGAGAAGGTTGAGAAGATTGGGGAAGGAACCTATGGCATTGTTTACAAGGCTCACGACCGCGTTACCAACGAGATCATCGCTCTCAAGAAGATTCGCCTTGAGCAAGAGGATGAAGGCGTTCCTAGCATTGCAATTAGCGAGATTTCTCTCTTCAAGGAAATGCAGCACATGAATATTGTTAGAAAGACCACCGACACTGGCAAGATGAGGTACCTCCCTCACATGCCTTCTCGATTCAAGAGTGGCTTCAGAGAAGGTATTGAAGCTGCACCAAGGAAGAATGGAGTAGCTGCATCTGGAGAGACTGTACATGGGAATCATCATTATCTTAGTCAAGCTCTTCTGGAAGAAACCAGAGCAGCGTTACAAGTATGA 612 0.482 MTVAPPSLPSSNIHTQPSLCGTQRSLAPSTLFYPRTEELALLHPRTLVGFETSIDEEKRKKKTLEEKRKRKTSSLDSFYEKVEKIGEGTYGIVYKAHDRVTNEIIALKKIRLEQEDEGVPSIAISEISLFKEMQHMNIVRKTTDTGKMRYLPHMPSRFKSGFREGIEAAPRKNGVAASGETVHGNHHYLSQALLEETRAALQV* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g1015 203 ProSiteProfiles Protein kinase domain profile. 79 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1015 203 MobiDBLite consensus disorder prediction 1 20 - -
Amo10g1015 203 PANTHER CELL DIVISION PROTEIN KINASE 77 142 - -
Amo10g1015 203 SUPERFAMILY Protein kinase-like (PK-like) 76 141 IPR011009 -
Amo10g1015 203 PANTHER - 77 142 - -
Amo10g1015 203 Coils Coil 47 74 - -
Amo10g1015 203 Pfam Protein kinase domain 79 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g1015 203 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Amo10g1015 203 Gene3D Phosphorylase Kinase; domain 1 77 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g1015 Amo-Chr10 18906791 18908063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g1015 79 140 Core Cell Cycle Gene Families AT3G48750 85.484 1.25e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Amo10g1015 Pkinase 5.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g1015 K02206 - sspl:121751088 112.464