Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0975 ATGCCTCCAACTCCACAAGAACACGAGCAACCSCTCTTACTGGACTCACCGCAACAAGCCGATGAGTTAGAAGAAACAGCCTACGATTCTTCCGAGAAGATCGTGGTAGTTGGAATCGACGAGTCAGAGTACGAGTCCGGGAACTGGGCCCGGGCCCCACCGTTCTCATGGAGGAAGCTATGGCTATTCACGGGCCCGGGCTTTCTCATGAGCATAGCGTTCTTGGACCCAGGGAACCTGGAAGGAGACCTGCAGGCCGGTGCCATTGCGGGGTACTCGCTGCTGTGGCTGCTCATGTGGGCCACAGCCATGGGCCTGCTGATCCAGCTGCTGTCGGCCCGGCTCGGCGTGGCAACGGGCAGGCACCTSGCGGAGCTTTGTCGGGAGGAGTACCCGACGTGGGCTCGGAACGTGCTGTGGGTTATGGCTGAGGTGGCACTTATTGGTTCTGATATTCAGGAGGTTATTGGTAGTGCTATTGCTATAAGGATCCTTAGTAATGGCTTTGTGCCTCTTTGGGCTGGAAATTATGGTGTGCGGAAACTGGAAGCTGTTTTTGCTGTTCTCATTGCGATAATGGCGGTTGCCTTTGCATGGATGTTTGGTGAAACAAAGCCCAGTGGCAAGGAATTGCTTCTTGGTATTTTGATTCCGAAGCTTAGCTCTAGAACTATACAGCAGGCTGTTGGAGTTGTGGGCTGCATTATTATGCCTCATAATGTGTTCTTGCACTCTGCGCTTGTTCAATCAAGGAGGGTTGATCATCGGAATAAAGGCCGAGTTCAAGAAGCTCTTAATTATTACTCAATAGAGTCCACCATGGCCCTTATAGTCTCCTTTGTTATTAATATATTTGTCACAACCGTTTTTGCTAAGGGGTTCTATGGTACCGAACTAGCAAACAACATTGGTCTTGTAAATGCAGGACAGTATCTTCAGGAGCAGTATGGGGGTGGATTATTTCCAATACTGTATATATGGGGTATTGGGTTATTAGCAGCAGGACAAAGTAGCACTCTTACGGGTACCTATGCAGGTCAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGATGAGAGCACTAATTACACGAAGTTTTGCAATTATTCCAACTATGATAGTTGCTCTTATTTTCGACACCTCTGAGCAATCGTTAGATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTTCAAATCCCCTTTGCACTTATTCCCTTGCTTTGTTTGGTGTCAAAGGAGCAGATAATGGGAAGTTTCAGAATTGGCCCCGTCCTCCAGATTATTTCATGGCTCGTGACTGTTCTGGTGATAGTGATTAACGGCTACCTTCTGCTGGAATTCTTCTCGCACGAAGTGAATGGCGCAATAGTCGGCACTGTAGTGTGCGTGCTAACARCTGCATATGTTGCATTCATAGTATACCTTATTTCACGGGCCGTTACGTATTCACCTTGGCAAAGTGTGACACAGCGAAAGTCAAATACTAACTCAGAGTTGGAGTAA 1518 0.473 MPPTPQEHEQPLLLDSPQQADELEETAYDSSEKIVVVGIDESEYESGNWARAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARNVLWVMAEVALIGSDIQEVIGSAIAIRILSNGFVPLWAGNYGVRKLEAVFAVLIAIMAVAFAWMFGETKPSGKELLLGILIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRRVDHRNKGRVQEALNYYSIESTMALIVSFVINIFVTTVFAKGFYGTELANNIGLVNAGQYLQEQYGGGLFPILYIWGIGLLAAGQSSTLTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEQSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGSFRIGPVLQIISWLVTVLVIVINGYLLLEFFSHEVNGAIVGTVVCVLTXAYVAFIVYLISRAVTYSPWQSVTQRKSNTNSELE* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0975 505 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 19 500 - -
Amo10g0975 505 Pfam Natural resistance-associated macrophage protein 81 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo10g0975 505 Hamap Divalent metal cation transporter MntH [mntH]. 46 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo10g0975 505 MobiDBLite consensus disorder prediction 1 21 - -
Amo10g0975 505 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 58 421 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo10g0975 505 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 19 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo10g0975 505 PRINTS Natural resistance-associated macrophage protein signature 335 354 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo10g0975 505 PRINTS Natural resistance-associated macrophage protein signature 397 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo10g0975 505 PRINTS Natural resistance-associated macrophage protein signature 363 380 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo10g0975 505 PRINTS Natural resistance-associated macrophage protein signature 139 165 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0975 Amo-Chr10 17298150 17301744 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0975 21 484 Inorganic Solute Cotransporters AT1G47240 76.827 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0975 K21398 - gmx:100807811 828.165