Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0947 ATGAGCAAGAAGAACCGGAAATTCAGGGATCTTCATGGAGTTCTTAGCCTTCTAGCTTTGTGCTTGTTGTTTCAGAGCTTTGGTATATGCCACTCTTTGAACGAAGAAGGTAGAGCTCTATTGAAGTTGAAGGAAAGGATTGTGAGTGACCCTTTTGGAGCTTTGTCAGATTGGGTTGATGATCAAGTATCTGTTGACCCTTGCAATTGGTTTGGTGTTGAGTGTTCCTCATATGGAAGAGTTGTGGTCTTGAATTTGAAAGATCTTTGTCTTGGAGGAACTCTGACACCGGAGCTCGCGAACCTTGCTCATATAAAGTCCATTGTGTTGAGAAACAATTCTTTTTCCGGAATAGTTCCTGAATGTATTGTGCACTTGAAAGAATTGGAGGTTTTGGATTTGGGCTACAACAACTTCAGTGGACCTCTACCTGCAGATCTTGGGAGTAATATTTCGTTATCGATCCTTTTGCTGGACAACAATGATCTTCTTGGTGGGTTCTCTCCTGAAATTAACAAATTGAGTATGCTTTCAGAATCTCAAGTAGACGAAAAACAACTGATTAATTCTGATAAAATGCCGGCTTGTACAGAAAGATACACCTCATGGTATGTTATCAAGCATTTGAAAATGGTATACTTGTTTTGTTTCCTATTCTCTTCTTTGATTCACAATCTTAACTTTTTACATCTTTTTAAAAGGCATGTTGGCCAAAACAGTTTACGGAGGCTACTGCAATCTCGTGGGCATGGCGATATTCATAATCGTGCAGCAGCTAATCCTCTTAGCCCTACTCCATCCCCTCAGCCAGATCCTTCTTTAGCTTCCCCTCGGCCGAGTCCTGCTTCTGCTCCTTCTCCCTCACAGTCAAGTCCTCCTTTTGCTTCTCCATCCCCATCGGAAAAACCACAACCACGGCTAAAGCCTGTTTCTCGCAATAGAAACAATTCTGTTGCTCCTCCTACTGCTTCACCACATGGAAATAATTCTGCTTCCCCTCCTACCGGTTCAACTTCAGGCTCTAAGATACAACCTGAAACCAAATCATCAAAGAGTCATCTAGCTGTTATCTTGGCCGGAGTTCTGGGTGGTGCTGCATTTCTTATTGTTTCGAGCATTGGGATATATCTCTGTAAAACGAACAAGGTAGCTACTGTAAAACCTTGGGCGACAGGATTAAGTGGACAGCTTCAAAAGGCATTTGTGACAGGTGTGCCAAAGTTAAAGAGATCCGAGCTTGAGGCAGCATGTGAAGATTTCAGTAATGTAATCGGCACATCGCCCATTGGTACAATTTACAAAGGGACTTTATCTAGTGGTGTTGAAATAGCTGTAGCATCTATTACAAAGGAAGACTCCAAGAATTGGTCAAAGACTTCAGAAACGCAATTTCGGAAGAAGATTGATACACTATCGAAAATGAACCACAAGAATTTTGTAAATCTTATTGGATTTTGTGAAGAAGAGGAACCGTTCACCAGAATGGTGGTCTTCGAATATGCCCCGAACGGAACACTATTTGAGCATTTACACATAAAAGAAGCCGAGCATTTGGAGTGGGGAACAAGACTTCGAGTCGCAATGGGAATGGCTTACTGCTTGCAACATATGCACCAGTTGGACCCTCCAATGGCCCATAGCAACCTTGACTCTCAAGCTATCCACCTCACCGATGATTATGCAGCCAAAGTATCAGACTTCAGTTACCTGAATGAAATAGTTTCGGCCGACACAAAAGCCGGTGCTAGAAAACACACCACTGACACTACATTAACAAGTAATGTTCACAGTTTTGGAGTCATATTACTTGAAATAGTAACCGGCCGGCTTCCTTCCTCGGCAGATAGTGGCTCTATTGGAGACTGGATGTTGCCCTTCTTACAAGGCAACCGCCGGTCGCTCAGCGAAATCATTGATCCGACACTATTGTCTTTCCAAGAAGAACAGCTCCAGGGAATCACTGCTTTGATCAAGTCTTGCATGGATCGCGATCCACAGCGAAGACCAACAATGAAAGAGGTGAGTGAGAGATTGAGAGAGATAACGAAGATTACGCCGGAACAGGCCGTTCCGAAGCTTTCACCACTTTGGTGGGCAGAGCTTGAGATTTCTTCTTTGGATGCAAGCTGA 2130 0.4333 MSKKNRKFRDLHGVLSLLALCLLFQSFGICHSLNEEGRALLKLKERIVSDPFGALSDWVDDQVSVDPCNWFGVECSSYGRVVVLNLKDLCLGGTLTPELANLAHIKSIVLRNNSFSGIVPECIVHLKELEVLDLGYNNFSGPLPADLGSNISLSILLLDNNDLLGGFSPEINKLSMLSESQVDEKQLINSDKMPACTERYTSWYVIKHLKMVYLFCFLFSSLIHNLNFLHLFKRHVGQNSLRRLLQSRGHGDIHNRAAANPLSPTPSPQPDPSLASPRPSPASAPSPSQSSPPFASPSPSEKPQPRLKPVSRNRNNSVAPPTASPHGNNSASPPTGSTSGSKIQPETKSSKSHLAVILAGVLGGAAFLIVSSIGIYLCKTNKVATVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGTSPIGTIYKGTLSSGVEIAVASITKEDSKNWSKTSETQFRKKIDTLSKMNHKNFVNLIGFCEEEEPFTRMVVFEYAPNGTLFEHLHIKEAEHLEWGTRLRVAMGMAYCLQHMHQLDPPMAHSNLDSQAIHLTDDYAAKVSDFSYLNEIVSADTKAGARKHTTDTTLTSNVHSFGVILLEIVTGRLPSSADSGSIGDWMLPFLQGNRRSLSEIIDPTLLSFQEEQLQGITALIKSCMDRDPQRRPTMKEVSERLREITKITPEQAVPKLSPLWWAELEISSLDAS* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0947 709 MobiDBLite consensus disorder prediction 309 347 - -
Amo10g0947 709 MobiDBLite consensus disorder prediction 254 347 - -
Amo10g0947 709 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Amo10g0947 709 PANTHER PROTEIN MALE DISCOVERER 2 8 709 - -
Amo10g0947 709 Gene3D Ribonuclease Inhibitor 32 202 IPR032675 -
Amo10g0947 709 Pfam Leucine rich repeat N-terminal domain 34 76 IPR013210 -
Amo10g0947 709 ProSiteProfiles Protein kinase domain profile. 418 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0947 709 Gene3D Phosphorylase Kinase; domain 1 390 500 - -
Amo10g0947 709 MobiDBLite consensus disorder prediction 263 304 - -
Amo10g0947 709 Gene3D Transferase(Phosphotransferase) domain 1 501 692 - -
Amo10g0947 709 PANTHER BNAA09G55080D PROTEIN 8 709 - -
Amo10g0947 709 SUPERFAMILY Protein kinase-like (PK-like) 401 678 IPR011009 -
Amo10g0947 709 Pfam Protein tyrosine and serine/threonine kinase 421 678 IPR001245 GO:0004672|GO:0006468
Amo10g0947 709 SUPERFAMILY L domain-like 36 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0947 Amo-Chr10 15932802 15936122 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0947 404 680 Receptor kinase-like Gene Family AT3G19300 31.864 1.85e-39 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Amo10g0947 PK_Tyr_Ser-Thr 2.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0947 - - gmx:100784541 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1415 20 31686449 31690254 Amo10g0947 10 15932802 15936122 hybridization