Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0918 CACGCACCAGCAGCCGCTAGCCGTTCTCCGTCTTTCTCCTCTCCTTCTGGACAAAGAAGAAGAAGAACCCAGTTCCTCCAGCAAAGACTTTTTCTGACGGCACCGTCGGCTCCGTCGCCGTTGCAGCTCACAGCACCGCTCTCGTCGTGTACTTGCATTTCTTTGCCAACATCATCCAGTGATCGATTTTTTCCAGACAAAGCTATAGATCCTATTGATGAAGCTGGTTCACGTGTTCAGCTGCAACATGCACATTGCAATGAGAATCAAATGGACCAACCTAGTGTTTCTAGAAAAAGAAACTCAAAACTCAAGGCAATTCCCAACTTGCTTAATGATCTCCAGATTATATACAAGCTGGAATTGAAAGCAGAAGGAAATAGCGATGGTCACCAATCATCACAGGAAGTCTTGCCAGTATTTAATCAGGATCTAAATTGCCGTCCTTTGGATGAAAACACAACTGAGTTGATCGACAAGAAGACAAATGTTGAAAGCTTACCAGGTTTTGGAGCAAAGAAAAGGAGGGCTCAAAGCGACCACATAGCGAAAATTGCTTTACCAGATTTGGTCAAGTATTTTGATGTGCCAATTTTCTCAAGAGAAAGTGCAGATGGTGAAGATGGCATGGTGATTAAGATGGATGGAGAGCTATGGCAATCTCTAGAGTCTTGTTTTGTTTCCATTATTCTTGCGTTGTCGTCTGCAGATCAGGCAGAGGTTTTAACTGAATGGTTGGAAAATGAGTGTATTCGGTATCCGGACCTGAGGCATTTGAAGTACGGTGCTATAGATCAACAATATCTGGCTCAGGCCCGAGAGCTCGGCGTGATGGATCCTTTGTTGGATTTGGCTCAAAATGGCACAGATAGAGAAAAAAAGAAAGCAGCACAATTGTTAGAACGCATGAGCAGGTTCCTTGAGCAGTAG 930 0.4419 HAPAAASRSPSFSSPSGQRRRRTQFLQQRLFLTAPSAPSPLQLTAPLSSCTCISLPTSSSDRFFPDKAIDPIDEAGSRVQLQHAHCNENQMDQPSVSRKRNSKLKAIPNLLNDLQIIYKLELKAEGNSDGHQSSQEVLPVFNQDLNCRPLDENTTELIDKKTNVESLPGFGAKKRRAQSDHIAKIALPDLVKYFDVPIFSRESADGEDGMVIKMDGELWQSLESCFVSIILALSSADQAEVLTEWLENECIRYPDLRHLKYGAIDQQYLAQARELGVMDPLLDLAQNGTDREKKKAAQLLERMSRFLEQ* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0918 309 Pfam AAA lid domain 60 92 IPR041546 -
Amo10g0918 309 PANTHER PROTEIN RKD5 82 199 - -
Amo10g0918 309 MobiDBLite consensus disorder prediction 7 21 - -
Amo10g0918 309 PANTHER PROTEIN RKD4 82 199 IPR044607 GO:0003700
Amo10g0918 309 MobiDBLite consensus disorder prediction 1 21 - -
Amo10g0918 309 Gene3D - 60 85 - -
Amo10g0918 309 Coils Coil 297 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0918 Amo-Chr10 15124721 15127645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0918 256 309 U-box Gene Family AT3G46510 62.963 9.09e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0918 - - adu:110276779 180.644