Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0909 ATGTTCGAAGAATGCATTGCCCCGTTAGTTGATGGCTTATTCCAAGGATATAATGCTACTGTACTTGCGTATGGCCAGACAGGATCTGGGAAAACATATACAATGGGAACTGGCTATAGTGACAATTGTCAGACTCAGGCTGGATTAATTCCTAAGGTCATGAATGCCTTGTTCAGCAAGATTGAAACACTAAAGCATCAGACAGAATTTCAGTTGCATGTGTCCTACATTGAGATTTTGAAGGAAGAGGTGAGGGACTTGTTAGATTCTGTATCTAACAGTAAATTGGAATCTGCTAATGGCAATTCTGGAAAAGCAACTGTTCCTGGGAGAACACCGATACAAATTCGTGAAACCTCAAGTGGAGTCATAACACTGGCAGGATCAACTGAAGTTGCTGTGAGTACACTACAGGAGATGTCTACTTGCTTGGAGCAGGGTTCTTTAAGTAGGGCAACAGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATCTTCACAATCACACTAGAACAGATGCGCAAGCTCCATTCAATTTCTCCCGACAATGACTCTTCAGACGAGGATATGGGTGAAGAATACCTTTCTGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGATGGTGTTCGTTTAAAAGAAGGCATACACATCAATAAAGGTCTCCTTGCACTTGGAAATGTCATAAGCGCATTGGGAGATGAGAAAAAGCGAAAGGAGGGTATGCATGTCCCGTATCGGGATAGCAAACTCACTCGACTTTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCCGACATCAATGCTGAGGAAAGTCTCAATACTCTCAAATATGCAAATCGTGCTCGCAATATTCAAAATAAGCCTATTGCTAATCGAGATTTGATATCCAATGAGATGCAGCAAATGCGTCAACAGTTAAAGTACTTGCAGGCTGAACTTTGTGCTCGGGGAGGAACTCCAGCTGATGAAGTGCGGGTTCTCAAGGAAAGGATTGTGTGGCTTGAGGCGACTAATGAGGGCCTCTCTCATGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGACAAATGTGAAATTGATGAACCAGATGGTCATATTTATCTTGAAAGACACTTTCAGAGCTCTGTTTCATCTGATCATCCCATGATTGAAAGTATATCTGGTGACGATTCAGGTGAAAGTGATGAAGCAGTAAAGGAATTGGAGCATGCACTTTTGCAGAATACCATGGATAAAGAGATGAATGAGTTAAATAAGCGCTTAGAGCAGAAAGAGTCTGAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAAAAAATTATGGAGCTTGAAGAGGAAAAAAGAAAAGTGCAGCAAGAGAGGGACCATTTGTTGCATGAGGTAGAGAATCTTTCAGCTAATATTGATGGACTAGCACAGAAATCTCAAGATGTTCGTGGCCAAAAATTGAAAGCACTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAACCAGGTGCAGCTACTAAAGCAAAAGGAGAAGAGCGAAGAAACTGCAAAAAAATTGCAAGCTGAAATACAGTACATCAAGGCTCAAAAGGTCCAATTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGTTGAAAAAGGAGGGGAGAAGGAATGAGTATGAAAGACATAAACTTGAGGCTCTAAACCAGCGCCAAAAAAAGGTGCTTCATAGGAAGACAGAGGAAGCAACAATAGCCACAAAAAGGCTAAAGGAATTATTGGAAGCCCGCAAATCTTCTCCACGTGAAAACTCTGCTTATTCAAATGGACACCTTCAACCTGGGCTGGTTAATGAGAAATCCCTCCAAAAATGGCTTGATCAGGAGCTTGAGGTCGTGGTACATGTGCATGAAGTTCGTGCTGAATTCGAAAAGCAAAAGCAGGTCCAAGCTGCATTGGAGGAAGAGTTGGCTACACTGAAACAAGTCCATCAGTTCTCGGATTGCCAGAGTATCCCTACAGGACAGAACAAATATTCCAGATTATTATCCATGCCACCGGATGTAAAAGTCTCAAGAATAGCTTCTCTTGAGAATATGCTGGGCATGTCTTCGGCTGCTTTGAAAGCCATGGCTTTACAACTTACAGAGGCTGAAGCAAGGGAACGTGCATTAAGTAACCGTGGACGTTGGAACCAGTTACGCTCAATGGGAGATGCTAAGAATGTGCTTCAGTACTTATTCAATGCTACAGCAGAAGCAAGGTGTCAATTGTGGGAAAAGAATATAGAACTTCAGGACTTGAAAGAGCAAATAAACGAACTAGCAAGGCTACAGAAAGAAAGTGAAACACAGAGAAAAGAACTTCTAAAGGAGCAAACACTTAAGGAAGAAGCTGTTTCTGTCGCCTTGAACACATCAATGGAAAACTCTCGGTCCTTGAAACACCTTGCGGATGAATTGAGTGGCCCATTGTCTCCCATGTCACTTCCCGCAACAAAGCAACTTAAATTCACCCCTGGAGTTGTTAATGGGTCAGTTACAGAGTCAGCTACTATTATGGACAATGGAAGAAAGATGATACCCATTGCGGAGTTGTCAGCAAGGAGGCTAGCAGCTGTTGGGCAAGCTGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGATACAGTTTAAATGGAAATGGCAGAAACCGTGGAAACTTTCAGAATGGATCAAACACAGCGACGAAACAATCATGAGGTCAAGGCCTCGAGCACAGGCCTTGATCAATGCTATGTGA 2889 0.4258 MFEECIAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYSDNCQTQAGLIPKVMNALFSKIETLKHQTEFQLHVSYIEILKEEVRDLLDSVSNSKLESANGNSGKATVPGRTPIQIRETSSGVITLAGSTEVAVSTLQEMSTCLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSISPDNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGMHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEESLNTLKYANRARNIQNKPIANRDLISNEMQQMRQQLKYLQAELCARGGTPADEVRVLKERIVWLEATNEGLSHELHEYRSRCAFVDKCEIDEPDGHIYLERHFQSSVSSDHPMIESISGDDSGESDEAVKELEHALLQNTMDKEMNELNKRLEQKESEMKRIGIDTEALKEHFGKKIMELEEEKRKVQQERDHLLHEVENLSANIDGLAQKSQDVRGQKLKALEAQILDLKKKQENQVQLLKQKEKSEETAKKLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRRNEYERHKLEALNQRQKKVLHRKTEEATIATKRLKELLEARKSSPRENSAYSNGHLQPGLVNEKSLQKWLDQELEVVVHVHEVRAEFEKQKQVQAALEEELATLKQVHQFSDCQSIPTGQNKYSRLLSMPPDVKVSRIASLENMLGMSSAALKAMALQLTEAEARERALSNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLWEKNIELQDLKEQINELARLQKESETQRKELLKEQTLKEEAVSVALNTSMENSRSLKHLADELSGPLSPMSLPATKQLKFTPGVVNGSVTESATIMDNGRKMIPIAELSARRLAAVGQAGKLWRWKRSHHQWLIQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINAM* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0909 962 PRINTS Kinesin heavy chain signature 201 219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo10g0909 962 PRINTS Kinesin heavy chain signature 16 37 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo10g0909 962 PRINTS Kinesin heavy chain signature 255 276 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo10g0909 962 PRINTS Kinesin heavy chain signature 156 173 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo10g0909 962 Coils Coil 77 97 - -
Amo10g0909 962 Coils Coil 461 502 - -
Amo10g0909 962 Coils Coil 741 761 - -
Amo10g0909 962 Gene3D Kinesin motor domain 1 342 IPR036961 -
Amo10g0909 962 PANTHER KINESIN-LIKE PROTEIN KIN-4B 1 961 - -
Amo10g0909 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 336 IPR027417 -
Amo10g0909 962 Coils Coil 609 629 - -
Amo10g0909 962 Coils Coil 511 562 - -
Amo10g0909 962 Coils Coil 429 456 - -
Amo10g0909 962 ProSitePatterns Kinesin motor domain signature. 200 211 IPR019821 GO:0003777|GO:0005524|GO:0007018
Amo10g0909 962 Coils Coil 791 828 - -
Amo10g0909 962 Pfam Kinesin motor domain 1 305 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo10g0909 962 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 961 - -
Amo10g0909 962 Coils Coil 313 333 - -
Amo10g0909 962 ProSiteProfiles Kinesin motor domain profile. 1 305 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo10g0909 962 Coils Coil 669 696 - -
Amo10g0909 962 CDD KISc_KIF4 1 306 - -
Amo10g0909 962 SMART kinesin_4 1 313 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0909 Amo-Chr10 14743749 14752887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0909 9 351 Calmodulin-binding Proteins AT5G65930 36.735 6.39e-53 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0909 - - gsj:114393858 1556.58