Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0908 ATGCATTACCTCCACTCACTCTTGCTCCTCCTCATTTTGGTGCTAACCGCCGATGCCAGTCCCTCAACGGAAGTAAACACAATGCTACCATCCGACGCCGTTTCACTGCTCTCCTTCAAGTCAAAAGCAGACCTCGACAACAAGCTTCTATACGCCTTAAACGAGCGCTACGACTACTGCGAGTGGCAAGGAGTGAAGTGCGCACAAGGCAGAGTGGTTCGCTTCGTCGTCCAAGGCTTCTCTCTCAGGGGCACCTTCGCCGCCGACACACTCGCCCGCCTCGACCAGCTCCGCGTCCTCAGCCTCCGTAACAACTCACTCTCCGGCACCATCCCTGACCTCTCCCCTCTTAAAAACCTCAAGTCCCTCTTCCTCGACCGTAACCGATTTTCCGGAACGTTCCCGCGCTCGGTTCTCACGCTTCATCGGTTAGTTACTCTCTCACTCGCTCATAACGAGCTTGCCGGTCCGATTCCGGTTCGGCTCAACTCGCTCGACCGGTTAATCTCCCTCCGGCTGGATTCTAACTACTTTAACGGCACTCTCCCTGCGCTGAATTTGTCGTTTCTTGAAACGCTTGATGTTTCGAATAACAACCTTACCGGTCCCGTGCCTGTTACGCCCACGCTCGCGAAGTTCGATGCGCCGTCGTTTTCAGGAAACAATGACCTCTGCGGAGAGATTATCCACAAGCCATGCGATCGGCATTCTAGATTCTTCGGTGGCGGTGGCTCTTCTGCTGCCACGTCATCCGGCGCGCCGCTAGGGCAGAGCGAGCAGGGGATCGTGGTGGTTCATTCCCCGATCAAGGAAAGGAAGCACAAGAGCAGTGGATTGGTTCTCGGAATCTCCGTCGCGGCCGCGGTTCTCGTTGGCGCAGGGCTTGCGGCGGTTGCGGTGGCGAGGAAGAAGAATAGAAACAAGCAAGGGGGAATGCTCGGGGAAAAATTCGAGACGGAGAAAACGACGGCGTTGGAGGTTGAAACAGGAAGAAATAACCCTGCGCAGTTGGTGAGGGAAAGGGAAAACGAAAACGACGTCCTTTCAACGATGAAGGTGAAGAGGATAGAGGAGATAGAGAGGGCGCATAAGAGTGGGAAGTTGATATTCTGCTACGGTGAGGCGCAGCCGTACACGCTGGAGCAGCTGATGAGGGCGTCGGCGGAGCTTCTTGGGAGGGGGAGCGTGGGGACCACTTACAAGGCGGTTCTTGATTCGCGGCTGATCCTGACAGTTAAGAGAATGGACGCCGGGAAGACGGCAGCGATGAGCGGAGAGGTGTTTGAGAGGCACATGGAGATGGTTGGTGCTCTTCGGCACCCGAATTTGGTTCCGGTGAGGGCTTATTTTCAGTCCAAGGGCGAGAGGCTTGTCATCTATGATTATCAGCCAAATGGAAGCCTTTTCAATCTTGTTCATGGCTCAAGATCAGCAAGGGCAAAGCCCCTCCATTGGACATCATGCTTGAAAATAGCAGAAGATGTAGTTCATGGACTTGCTTATGTACATCAAGCTTCATCCTTAATTCATGGCAACCTAAAATCCTCGAATGTCCTTCTTGGAGCAGACTTTGAAGCGTGCATTACAGACTACGGCTTGTCCTTTCTGGCAGATTCTTCGGTCGCTGAAGATGCCGATTCCACAGCCTATAAAGCACCAGAAGTCCGCCAGTCTAGCCGCAGAGCATCTTCCAAGTCTGATGTCTATTCTTTCGGCGTGCTTCTGCTGGAGCTTTTGACCGGTAAACACCCCTCTCAACACCCTGTGCTTGTGCCAACGGATTTGCAAGACTGGGTTAGAGCAATGAGGGACGACGATGATAGCGAAGACAACCGGCTCGAAATGCTCACAGAGGTTGCCAGTATTTGCAGTGCTACCTCACCAGAGCAGAGACCGGCAATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGGAGAGCGCAACATGA 1950 0.5338 MHYLHSLLLLLILVLTADASPSTEVNTMLPSDAVSLLSFKSKADLDNKLLYALNERYDYCEWQGVKCAQGRVVRFVVQGFSLRGTFAADTLARLDQLRVLSLRNNSLSGTIPDLSPLKNLKSLFLDRNRFSGTFPRSVLTLHRLVTLSLAHNELAGPIPVRLNSLDRLISLRLDSNYFNGTLPALNLSFLETLDVSNNNLTGPVPVTPTLAKFDAPSFSGNNDLCGEIIHKPCDRHSRFFGGGGSSAATSSGAPLGQSEQGIVVVHSPIKERKHKSSGLVLGISVAAAVLVGAGLAAVAVARKKNRNKQGGMLGEKFETEKTTALEVETGRNNPAQLVRERENENDVLSTMKVKRIEEIERAHKSGKLIFCYGEAQPYTLEQLMRASAELLGRGSVGTTYKAVLDSRLILTVKRMDAGKTAAMSGEVFERHMEMVGALRHPNLVPVRAYFQSKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVVHGLAYVHQASSLIHGNLKSSNVLLGADFEACITDYGLSFLADSSVAEDADSTAYKAPEVRQSSRRASSKSDVYSFGVLLLELLTGKHPSQHPVLVPTDLQDWVRAMRDDDDSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQEIKESAT* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0908 649 Gene3D Ribonuclease Inhibitor 185 233 IPR032675 -
Amo10g0908 649 Pfam Protein kinase domain 388 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0908 649 SUPERFAMILY Protein kinase-like (PK-like) 389 644 IPR011009 -
Amo10g0908 649 Gene3D Transferase(Phosphotransferase) domain 1 464 649 - -
Amo10g0908 649 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 5 648 - -
Amo10g0908 649 ProSiteProfiles Protein kinase domain profile. 385 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0908 649 ProSiteProfiles Leucine-rich repeat profile. 96 118 IPR001611 GO:0005515
Amo10g0908 649 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 648 - -
Amo10g0908 649 Gene3D Ribonuclease Inhibitor 30 184 IPR032675 -
Amo10g0908 649 Gene3D Phosphorylase Kinase; domain 1 349 462 - -
Amo10g0908 649 SUPERFAMILY L domain-like 29 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0908 Amo-Chr10 14738270 14743419 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0908 14 648 Receptor kinase-like Gene Family AT3G50230 54.211 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo10g0908 Pkinase 3.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0908 - - gmx:100783086 794.267