Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0890 ATGGTGTGTCAAAATCCACACAGCTATGGTCACAAGGATGTTTGGCACTTAGGCAACCCTCTAGATTCTCCAACTTCTCTTCTATTTGTTCAGGTTTCTTTAATCACCATGCTATCACAAGTGATTGAGGTTTGTCTCAAGCCTTTAGGACAATCCTCCCTTGTTTCACAGATTCTTGGTGGAGTGATATTTGGGCCATCAGTATTGGGACAAAAGAAGTCACTAGCAAATGCTTTGTTCCCAATGAAAGGTGCCATGGTGCTTGAAACACTTGCATCTTTTGGCCTAATGTTCTTCTTCTTCATAGTAACGGTGAAGATGGACATTGCAACAATGTTAAGGACAGAGAAACAAGCCATAGCWATTGGTCTCTCCACATTCTTCATCACATTGGRAATCCCAGGTGGATTATCATTTCTATTAAAGAACTATYTTTCTATGGACAAAAGCCTCTCAGAAGCTCTACCAGTCATAGCCATGTCACAAGCCATGACCGTCTTCATAGTGGTCTCCGTCCTCTTGACAGAGCTCAAGATCCTTAACACGGACATAGGCCGGCTAGCTATGTCCTCGGCTATGTCGGCCGACATTGTTGGCTTCTCATTGACAGTTCTAATGTTTGCAATAATGCAGAACAAGGGTGGCACCATTGTGTCCTTTCTTTGGATAATTCTGTCCATAGCTGCATTGGTAGTRCTCATCATTTATGTCATGAGGCCGGCRGTCATCTGGATGCTGAGGCGATCAGAAGGGAAGCCGGTCGACGAATTGTACYTTGTTTGTATCTTTATCTTTGTTCTGATCGCCGGATTCCTCAGCGAACTTATCGGCCAGCATTTCYTCATGGGGCCTATACTCTTCGGCTTGGCAATCCCCGAAGGGCCGCCCATGGGAACCACTTTGATAACTAAAATGGAGACTATATGTCTTGGATTCTTTTATCCAATCTACCTTGCTGTTAGTGGTTTGAAAACTAATGTGTTCAAGATCAGCTTCCGGTCCTTTTGGATTGTTGGTGTTGTAGTTTTTGTGGCTTCCATTGCAAAGATCGTTGCTGTTATGTTGCCAGGGTATTATAGTAGTAATATGAGCATGAAAGAGTGTTGCATGATTGGGCTCATTCTGAATGCAAGAGGCATAGCAGAACTTACCCTTTACAATATGTGGAAGGGTAGCAAGTTATTAACGGAGCAAGAGTTCTCTTTGATGGTGGTATTCATTTTGATTGTAAATGCTATCATATCACCGCTTCTAAAGATGTTATATAATCCTTCAGAACAATACCATGCCTTAGGAAGATGCACAATTCAGCACACAAGGCGAGATTCGGAGCTTCGAGTCATGATCTGCATTCACAACAACGAAAACATCCCTACACTGATGAACATTCTAGAAGCATCCTATGCAAGCGGAGAGAGCATGGTTGGAGTCATAGCATTAATCCTAATAGAACTTCTTGGAAGATCAAGGCCTCTTCTTGTTGCTCACCAAGAACATGAAACATTGAGGTCAGAACCATGCAGCTCAACTCAAATAGACAATGCATTGAAGCAATATACACAACAGAACGAAGGTTATGCAACAGTTGAGTCCTTCTCATCGATCTCAAACTTGGACACAATGCACGATGATGTCTGCAGAATAGCACTTGACAAAAGAGCRCACATTCTAATCGTGCCATTTCACAAGCGTTATGAGATAGATGGAACAGTTGAAGTGATTAACAGAGCAATGCAGATTATGAACAACCGAGTCCTCGAAAAAGCGCCATGCTCAGTTGGAATCCTCATTGACAGGGGAATCTTGTGCGGATCCTCATCACTCTTAGTCTCTKGGACAACATACCACGTCGCCGTGTTCTTCATCGGCGGCGCGGACGACGCGGAGGCGCTTGCTTACAGCTCAAGAATGGCCCGGCACGAGATAGTCCACGTGACGTTAGTCCGATTCCTGCTCTTCGGAGAGGAGAATTCGAAGGAGAGGAAGCGTGACAGCGACCTTGTGGATGAGTACAGATACTATAATGCAGGGAACCGCCACTTTGAAGTGATGGATGAAGTGGTTAAAGATGGGATAGAGATGAGTTCTTGTATAAGAAGGATAATTGACTATTTTGACCTTGTGATGGTTGGAAGAGAACACCCTGAATCTGTTCTGCTTCAAGGGCATGATCAATGGAGTGAGTGTCCTGAGTTAGGGACAATTGGGGACATGTTAGCTTCACAGGATTTTGTGACAAAGGCTTCGTTGCTTGTGGTGCAACAACAGAGGGTAAGAGGGAGGGTTATTAAGAACACTAATGTGAATCCTATGCCACCTCAAAAGGATCAAATGATGATGGTACCTGATGTTGTTCTTCCTCATGATGAGCTCAATAGAGCTTCTTGTTCTATTTCAGTAGTGGACAGATGA 2412 0.4366 MVCQNPHSYGHKDVWHLGNPLDSPTSLLFVQVSLITMLSQVIEVCLKPLGQSSLVSQILGGVIFGPSVLGQKKSLANALFPMKGAMVLETLASFGLMFFFFIVTVKMDIATMLRTEKQAIAIGLSTFFITLXIPGGLSFLLKNYXSMDKSLSEALPVIAMSQAMTVFIVVSVLLTELKILNTDIGRLAMSSAMSADIVGFSLTVLMFAIMQNKGGTIVSFLWIILSIAALVVLIIYVMRPAVIWMLRRSEGKPVDELYXVCIFIFVLIAGFLSELIGQHFXMGPILFGLAIPEGPPMGTTLITKMETICLGFFYPIYLAVSGLKTNVFKISFRSFWIVGVVVFVASIAKIVAVMLPGYYSSNMSMKECCMIGLILNARGIAELTLYNMWKGSKLLTEQEFSLMVVFILIVNAIISPLLKMLYNPSEQYHALGRCTIQHTRRDSELRVMICIHNNENIPTLMNILEASYASGESMVGVIALILIELLGRSRPLLVAHQEHETLRSEPCSSTQIDNALKQYTQQNEGYATVESFSSISNLDTMHDDVCRIALDKRAHILIVPFHKRYEIDGTVEVINRAMQIMNNRVLEKAPCSVGILIDRGILCGSSSLLVSXTTYHVAVFFIGGADDAEALAYSSRMARHEIVHVTLVRFLLFGEENSKERKRDSDLVDEYRYYNAGNRHFEVMDEVVKDGIEMSSCIRRIIDYFDLVMVGREHPESVLLQGHDQWSECPELGTIGDMLASQDFVTKASLLVVQQQRVRGRVIKNTNVNPMPPQKDQMMMVPDVVLPHDELNRASCSISVVDR* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0890 803 Pfam Sodium/hydrogen exchanger family 34 419 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo10g0890 803 PANTHER CATION/H + ANTIPORTER 2 770 - -
Amo10g0890 803 Gene3D - 26 430 IPR038770 -
Amo10g0890 803 PANTHER CATION/H(+) ANTIPORTER 15-LIKE 2 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0890 Amo-Chr10 14408188 14411808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0890 1 755 Antiporter Super Family AT2G13620 36.213 7.62e-172 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0890 - - adu:107469318 1464.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1329 20 28151648 28155855 Amo10g0890 10 14408188 14411808 hybridization