Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0858 ATGATTTTCAAGACACTAGAAGAAGTTGGAAAGTTCTACAAACATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGAGACGCAGACAAGATTAAGAATCAACTAATTGTATGCCCTAGAGAGGGGAGGTGGAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCGGCCAGAATTTACGTACACAAAATGAAGGATGTTGGTCTTTGGATAATTTCCAAAGTTGTTTTGAATCACTCACATCCTTGTTGTCCAGACCAGGCTGAGATGCTCAAACAACACAGGGAGCTTAGCATGTTCGTGCGCCGTAGCATCGAAACCCACGAGGAACTATACGAGGATTGCCATATATGGATTCCGGTTTACTTGGATCACCACTTTTGGGCTGGGATGAGAAGCACGCAAATGAGCGAGAGTATGCATTTATTTTTCAACAAGTTCATCACATGGAATAGCTCATTGAGACAATTCGTGAAGCAATACGACAGTTGCCTAGCAAGCAGAGAGCAAGCAGAGAGAGAATTTAATGCTGCAGATTTTCACACCCATGTATATACCCATGAGAAGTTCAAGGAAGTTCAAGCTCAATTCAGAGGTAAAGTGAATTGTATCACAAGATCAATGCATTCCACTCTAGGTTTCACAGCATATGAAGTAATAGAGCAAGTTTCCAACTCCACATTCAATAAGTTTTGTCATTGCTTGCTGTTTGAGTCTTGGGGCATATTGTGCCGCCATTCCTTAAGTGTCCTAAGCTTTGAGCGAGTGGATAATGTGGCACCGAAATACATATTGGAACGTTGGAGCAAGAACATAAAGAGAAGTCATACACACATTAAGAGCAGCCAAGATGAACCTCTATTGGAGCCAAGAAGTAAGAGATTTGAAGAATTGGTGTTTCAGTCACACAATATATGA 954 0.4099 MIFKTLEEVGKFYKHYSKLAGFSTKIRNTTRDADKIKNQLIVCPREGRWKSKISPTLKTNPSAGLNCPARIYVHKMKDVGLWIISKVVLNHSHPCCPDQAEMLKQHRELSMFVRRSIETHEELYEDCHIWIPVYLDHHFWAGMRSTQMSESMHLFFNKFITWNSSLRQFVKQYDSCLASREQAEREFNAADFHTHVYTHEKFKEVQAQFRGKVNCITRSMHSTLGFTAYEVIEQVSNSTFNKFCHCLLFESWGILCRHSLSVLSFERVDNVAPKYILERWSKNIKRSHTHIKSSQDEPLLEPRSKRFEELVFQSHNI* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0858 317 ProSiteProfiles Zinc finger SWIM-type profile. 229 267 IPR007527 GO:0008270
Amo10g0858 317 Pfam FAR1 DNA-binding domain 11 96 IPR004330 -
Amo10g0858 317 SMART 26again6 242 269 IPR006564 GO:0008270
Amo10g0858 317 PANTHER OS03G0843700 PROTEIN 1 108 - -
Amo10g0858 317 PANTHER OS03G0843700 PROTEIN 121 296 - -
Amo10g0858 317 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 108 IPR031052 GO:0006355
Amo10g0858 317 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 121 296 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0858 Amo-Chr10 13906231 13908178 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g0858 FAR1 6.5e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0858 - - adu:107484182 357.066