Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0857 AAAAAGGTGAAATCAGCACTCAATGATCCAAGTGGAAATAAGCATGGTCGCGGCCACATCAAATTCATCCGTTGTTCCAACCGTGGCAAGTGCTGCCTTAAGGACAAATCAATCAAGCGGTTCCTTGTGAGGAACATTGTTGAGCAAGTTGCAGTTCGTGATGTTCAGGAAGCCTGTTTCTATGAGCAATACACTCTTCCGAAGCTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGCCATCCACTCTCATCTTGAGAGCGTGCATTCTCGCACCGATAGAAGGAATCGCGAGCCGCCACAGTGCTTTGCCAAGCATAGAGATGATGCACCAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGTGGAGTAGGAGCTGCCCCTCGATATATTGGAGGCTGA 408 0.4975 KKVKSALNDPSGNKHGRGHIKFIRCSNRGKCCLKDKSIKRFLVRNIVEQVAVRDVQEACFYEQYTLPKLYVKMQYCVSCAIHSHLESVHSRTDRRNREPPQCFAKHRDDAPRPGQPGQAPRPAGGVGAAPRYIGG* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0857 135 MobiDBLite consensus disorder prediction 86 112 - -
Amo10g0857 135 ProSitePatterns Ribosomal protein S26e signature. 75 82 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo10g0857 135 MobiDBLite consensus disorder prediction 86 135 - -
Amo10g0857 135 Pfam Ribosomal protein S26e 13 107 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo10g0857 135 Gene3D Ribosomal protein S26e 8 116 IPR038551 -
Amo10g0857 135 PANTHER 40S RIBOSOMAL PROTEIN S26 12 130 IPR000892 GO:0003735|GO:0005840|GO:0006412
Amo10g0857 135 PANTHER 40S RIBOSOMAL PROTEIN S26 12 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0857 Amo-Chr10 13838778 13841775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0857 13 118 Cytoplasmic Ribosomal Protein Gene Family AT2G40510 71.698 5.99e-52 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0857 K02976 - gmx:100784958 179.489