Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0850 CGACTTCAACTACACTTCGTCACAATCATCACAATATATTTTTCTCCTTTGAAATCCACCACCCCATATACAATTTCCCTCTTAACACAGCGTTTCAAGAGTAACTACATTAACTCCATAAAGTGCAATGCATTCTTGGATAACATCAAAGAGTTATTGTTGGAGTTGGACCCCACATTAGGGAATTTACAAAAATGGGGGTTTCTTGCTTTTGCTAGTTTGTCATGGATTTACTTAACTGCAAGGCCTGGTCTTTTTGTTGGAGCCATTGATGCATACTTTATGGCTCCAATTCAAATGGTTTTGGATAGTTTATTTGGAAGGAGAAGTCTCAAAAGGAGTGATTTTGTGATTGGAGATAAATTAGGAGAAGGGTCATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGATTATCAAAGTTTACAAAAATGGGGGTTTCTTGCTTTTGCTAGTTTGTCATGGATTTACTTAACTGCAAGGCCTGGTCTTCTTGTTGGAGCCATTGATGCATACTTTATGGCTCCAATTCAAATGGTTTTGGATAGTTTATTTGGAAGGAGAAGTCTTAAAAGGAGTGATTTTGTGATTGAAGATAAATTAGGAGAAGGGTCATTTGAACAAGAGAGGATAAAGAAGAGTGGCAATAAGGCGAGGAATGTAATAACAAAGTTGGATGCAAAATCTAAGGACAAAGTCATTCTTAAAAAGGTATCCCTAGTTATGGTAGAGAACTCTGGCATATTGGAATTGAAGGAGCAGAAGAAGTTGGTGAATGTTGAGGAGTGGTTCAATTACAGACTCTCCAGAGCAGTTCCAAAAACGTGTGCTAAGTTTTTTGGAAGTTTTGTTGATGATAAAAGCAATTCACTTTTCACAAAAGGGTGGCTGTTCTCTTGCCGACTACATGACGGATTGAAACTTTCCTTCAAACTTGGAATCTGTCATGTTTCGACAAGTCTTGCAAGGGATAGACTCGTTGAAAAGAGATGCCTTGATCATCAAGCAATAATGCGCCAAATGATTACTTTGCTTAAGAAGATTCATGACACAGGCGTTGGTCACCAGGATATAAAGCCTGCCAACTTGGTGGTTACCAAGCAGGGACAAATCAAATTCATTAATTTTGGTTCAGCTATTGACCTGCAAATCGGAAAGAATTATGTTCCCAATTTTACCCCCTTTGGATCCTGA 1269 0.3515 RLQLHFVTIITIYFSPLKSTTPYTISLLTQRFKSNYINSIKCNAFLDNIKELLLELDPTLGNLQKWGFLAFASLSWIYLTARPGLFVGAIDAYFMAPIQMVLDSLFGRRSLKRSDFVIGDKLGEGSFEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKIDYQSLQKWGFLAFASLSWIYLTARPGLLVGAIDAYFMAPIQMVLDSLFGRRSLKRSDFVIEDKLGEGSFEQERIKKSGNKARNVITKLDAKSKDKVILKKVSLVMVENSGILELKEQKKLVNVEEWFNYRLSRAVPKTCAKFFGSFVDDKSNSLFTKGWLFSCRLHDGLKLSFKLGICHVSTSLARDRLVEKRCLDHQAIMRQMITLLKKIHDTGVGHQDIKPANLVVTKQGQIKFINFGSAIDLQIGKNYVPNFTPFGS* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0850 422 SUPERFAMILY Protein kinase-like (PK-like) 218 414 IPR011009 -
Amo10g0850 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 378 390 IPR008271 GO:0004672|GO:0006468
Amo10g0850 422 Pfam Protein kinase domain 351 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0850 422 Gene3D Phosphorylase Kinase; domain 1 208 333 - -
Amo10g0850 422 MobiDBLite consensus disorder prediction 128 162 - -
Amo10g0850 422 ProSiteProfiles Protein kinase domain profile. 220 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0850 422 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 361 419 - -
Amo10g0850 422 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 59 128 - -
Amo10g0850 422 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 167 320 - -
Amo10g0850 422 Coils Coil 127 161 - -
Amo10g0850 422 Gene3D Transferase(Phosphotransferase) domain 1 345 419 - -
Amo10g0850 422 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 361 419 IPR044803 GO:0004674|GO:0009579
Amo10g0850 422 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 59 128 IPR044803 GO:0004674|GO:0009579
Amo10g0850 422 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 167 320 IPR044803 GO:0004674|GO:0009579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0850 Amo-Chr10 13672753 13683423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0850 365 416 AGC Kinase Gene Family AT5G04510 39.623 7.64e-06 45.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Amo10g0850 Pkinase 2.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0850 - - pvy:116105165 253.062