Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0833 ATGGTTTCTAGAGAGCAAAAGAGAGCAGCACTATTGCACGAGAAGCTGCAACTTCTTCGTTCCATTACTAACTCTCATGCTCTTAACAAGACGTCGATTATAATCGATGCATCAAAGTACATCAGAGATCTAAAGCAAAAAGTAGAAAGACTCAATCAAGACATGGCGGCTGCACAAACATCCACTCACCAAAATCCTTTGCCTATGGTAAAAGTAGAAACCCTAGAGAAGGGGTTTCTTGTAAACGTGGTGTCAGCAAAGAGTTGTCCAGGTCTTCTTGTTTCCATATTGGAGGTGTTTGAAGAGATGGGTCTCACTGTTATGGAAGCTAGGGTTTCTTGCACAGACACTTTTCGCTTTCAAGCTGTTGGAGGAGAAAATGAAGAGGATGGTGAGAGTATTATTGATGCACAAGCTGTGAAACTAGCAGTGGGGCAAGCAATCAAGAATTGGAGCCAACAAAGTACTGATGATGATGATGATCATGATGATGATCAACAGTGA 504 0.4187 MVSREQKRAALLHEKLQLLRSITNSHALNKTSIIIDASKYIRDLKQKVERLNQDMAAAQTSTHQNPLPMVKVETLEKGFLVNVVSAKSCPGLLVSILEVFEEMGLTVMEARVSCTDTFRFQAVGGENEEDGESIIDAQAVKLAVGQAIKNWSQQSTDDDDDHDDDQQ* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0833 167 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 157 - -
Amo10g0833 167 Gene3D - 2 67 IPR036638 GO:0046983
Amo10g0833 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 66 IPR036638 GO:0046983
Amo10g0833 167 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 157 - -
Amo10g0833 167 Coils Coil 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0833 Amo-Chr10 13336856 13339518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0833 5 122 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.231 1.35e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0833 - - tcc:18600910 239.58