Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0827 ATGATGATGGTTGAAGAGAAGCCTGATGTGACATATAATGATGTTGGTGGTTGTAAAGAGCAGATTGAAAAGATGCGAGAAGTGGTTGAAGTTCCTATGCTTCATCCAGAGAAATTTGTCAAGCTTGGGATTGACCCTCCAAAGGGAGTTCTTTGTTATTGTCCCCCGAGATCTGGCAAAACACTTCTAGCAAGGGCTGTGGCTAATAGGACTGATGCTTGTTTTATAAGGGTTATTGGAGGTGAACTGGTTCAGAAATATGTTGATGAGGGAGCTCGGATGGTTTGGGAACTATTTCGGATGGCTCGTTAA 312 0.4295 MMMVEEKPDVTYNDVGGCKEQIEKMREVVEVPMLHPEKFVKLGIDPPKGVLCYCPPRSGKTLLARAVANRTDACFIRVIGGELVQKYVDEGARMVWELFRMAR* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0827 103 PANTHER 26S PROTEASE REGULATORY SUBUNIT 7 HOMOLOG A 1 103 - -
Amo10g0827 103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 102 IPR027417 -
Amo10g0827 103 Gene3D - 1 103 IPR027417 -
Amo10g0827 103 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 1 103 - -
Amo10g0827 103 Pfam ATPase family associated with various cellular activities (AAA) 50 103 IPR003959 GO:0005524|GO:0016887
Amo10g0827 103 CDD AAA 16 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0827 Amo-Chr10 13210057 13210538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0827 3 103 Calmodulin-binding Proteins AT3G56690 41.584 3.76e-20 82.0