Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0815 ATGGAGTTTGCTGCTAGATCTGGTGATGATGGAGGTGATGCACCACTCAAGGAAGAGAAGAAGAGAAGTGACGAGTATACTGATGATAGTGGAAGCCATGGTGATAATCATGATCATGCTCCTTCTAATAAGCAAGACACAACAATTGTCAAGGAGCCGCCACACATGAATAAGACTAATAACAACACTGAAAAATCCATGGCGGAAGAAGCTTCTGGAACAAGCGCGCTATTGGCAGCCAAAAAAGAAGAGGTTATTGATAAACAACTTGAAAGCACTAAGGCTGAAATGGGTGAGGTTCGAGAGGAGAATGAACGGTTAAAGATGTCGTTGAACAAGATCATGAGCGAGTACCGAATGCTTCAAATGCAGTTTCACAACATAGTTAACAACAAGCATGAAGATAATCAAGAAACAATAATGGAGGAAGCAGACCTAGTTTCGCTCAGCCTTGGAAGAGTTCCAGTTCCAAGAAGAAGCAATGAAGAAGATAAAAAAGTCTCTGATAGTAACAAGAGGAAGAAGGAGGATGAAGATGATGAAGAATTGAATGAGGAATTGGCACTTGGATTGGACTGCAAGTTCGAAACTTCGAAATCGGGGAGCACAACGGAAGCTACCAATTTGCCGAATAATAGTAACAAGGAAGAAGGTGGTGAGAGTACATGGCCACCACCAGCAAGCAAGGCCAGAGAAGGTGGTGGCGGCGGTGGTGGTGCGGCATCGGCATCGGCATCTGCATCAGTTGTAGAAGATGAAGTATCCCAACAGAATAATAATCCTGCTGCCAAGAAAGCTAGAGTTTGCGTCAGGGCAAGATGCGACACCCCGACTATGAATGATGGGTGTCAATGGAGGAAATATGGACAAAAGATTTCCAAGGGAAACCCATGCCCTCGAGCTTACTATCGCTGCACAGTTGCACCCTCGTGTCCCGTTAGAAAACAGGTGCAAAGGTGTGCGGAGGACATGTCGATTCTAATCACCACCTATGAAGGGAACCACAACCACCCTCTCCCTCTCACAGCCACCGCCATGGCTTCTACAACCTCCGCCGCCGCATCCATGTTACTTTCCGGCTCCTCAACCTCACACACTATGGCTCCCACAAACACGGCCACCGCGGCCGCAGCCGGCAACCTCCACGGCCTGAACCTCTACCTCCCAGACGGCTCAAAATCAAGACAAATATACGTCTCAAACCCCGCACTATCATCCACACCATCACACCCAACAATAACCCTTGACCTCACTTCTTCAAACCCTAATTTGAATAATAATAATTCCTCATCTCCATTTGTTAGGTTTTCTTCAAACTACCCTAACCAACCAATCAGATACCCTTCTTCCACAAGCCTTAGCTTCAGTACTTCCAACGATCCCAATCCACTTTCTTGGAGCAATAATGGATTCCTCAGTAGCTACAATAGTACTCATCATCAACCATTCAACAGAAGCATCAACATGCTCAGTAATAATAATTTGAACTTCGAAAGGCAACAACAACAACAAACAATGGAGAACTTCTATCAGTCTTTCATGCAAAGGAACAACAGCAAGAACGCATCATCATCATCATCATCATCATCATCATCAGATCCTATTGCCGCTGCAACAAAAGCAATAACAGCGGATCCCAGTTTTCAATCGGCTTTGGCTGCGGCCTTGTCTTCGTTCATTGGTGGCGGCAGCGGCATTGGAAGCACACATCATCAAGGGAATAATTATAACCAAGTTGGTGGTGGTGGTGGTGATGGAGAAAACAGTAATAAGATGAAATTTTCAGAGCTGTTTCCAGTTTCCTCTACCTTGGCTTCGAGTTCGAAAGTCATCAATAATAGTAATAATGGCGGATGTGGTTCGAGCTTCTTGAACAAAACGCAACCAACAAAAACAACACAGAATAATGGAAGCTTCATGTTTCTTCCACCTTCTTTGCCATTTTCTTCTTCTCCAAAGAGTGCTTCTGCATCTCCCGGTGATAATGGAGGTGATGATCATAGATCATCATGA 2013 0.4491 MEFAARSGDDGGDAPLKEEKKRSDEYTDDSGSHGDNHDHAPSNKQDTTIVKEPPHMNKTNNNTEKSMAEEASGTSALLAAKKEEVIDKQLESTKAEMGEVREENERLKMSLNKIMSEYRMLQMQFHNIVNNKHEDNQETIMEEADLVSLSLGRVPVPRRSNEEDKKVSDSNKRKKEDEDDEELNEELALGLDCKFETSKSGSTTEATNLPNNSNKEEGGESTWPPPASKAREGGGGGGGAASASASASVVEDEVSQQNNNPAAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVRKQVQRCAEDMSILITTYEGNHNHPLPLTATAMASTTSAAASMLLSGSSTSHTMAPTNTATAAAAGNLHGLNLYLPDGSKSRQIYVSNPALSSTPSHPTITLDLTSSNPNLNNNNSSSPFVRFSSNYPNQPIRYPSSTSLSFSTSNDPNPLSWSNNGFLSSYNSTHHQPFNRSINMLSNNNLNFERQQQQQTMENFYQSFMQRNNSKNASSSSSSSSSSDPIAAATKAITADPSFQSALAAALSSFIGGGSGIGSTHHQGNNYNQVGGGGGDGENSNKMKFSELFPVSSTLASSSKVINNSNNGGCGSSFLNKTQPTKTTQNNGSFMFLPPSLPFSSSPKSASASPGDNGGDDHRSS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0815 670 MobiDBLite consensus disorder prediction 196 219 - -
Amo10g0815 670 MobiDBLite consensus disorder prediction 621 658 - -
Amo10g0815 670 MobiDBLite consensus disorder prediction 571 592 - -
Amo10g0815 670 MobiDBLite consensus disorder prediction 621 670 - -
Amo10g0815 670 MobiDBLite consensus disorder prediction 248 263 - -
Amo10g0815 670 SUPERFAMILY WRKY DNA-binding domain 272 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g0815 670 MobiDBLite consensus disorder prediction 157 179 - -
Amo10g0815 670 Pfam WRKY DNA -binding domain 280 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g0815 670 Gene3D WRKY domain 263 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo10g0815 670 MobiDBLite consensus disorder prediction 11 45 - -
Amo10g0815 670 Coils Coil 90 117 - -
Amo10g0815 670 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 57 662 IPR044810 GO:0003700
Amo10g0815 670 MobiDBLite consensus disorder prediction 401 437 - -
Amo10g0815 670 MobiDBLite consensus disorder prediction 46 70 - -
Amo10g0815 670 ProSiteProfiles WRKY domain profile. 274 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo10g0815 670 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 57 662 - -
Amo10g0815 670 MobiDBLite consensus disorder prediction 1 81 - -
Amo10g0815 670 MobiDBLite consensus disorder prediction 152 266 - -
Amo10g0815 670 SMART WRKY_cls 279 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0815 Amo-Chr10 12912305 12918013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0815 97 578 WRKY Transcription Factor Family AT5G15130 39.494 4.31e-80 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo10g0815 WRKY 8.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0815 - - adu:107467779 1070.07