Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0812 ATGGGGAAGTCACCAGGAAAATGGATCAAAACTGTATTGTTTGGGAAGAAGTCATCGAAATCAAATATTTCAAAAGGAAGAGAGAAGCTTGTTAATCAAAAGGAAGGAGTGGTGACTTCCAAGGTATCAGAAACTGATTTGGCTTTAGATCCAACCCCCAATACCGTTGCCAAAAATGAGGAAGAGCTGGTGCTGGAGAATGATGAGTCAGAAACTGTTTTAAATGAAAATCAAGAAATAAACACAGTGGGATCTGTTCTCCAAGATTCACCACCTGATCCAGAGAAAATAAAGCTGGAGGAAGCAGCAACAAAGGCACAGGCTGCTTTCAGGGGTTACTTGGCACGAAGGGCATTTAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACCTTGTTAGGAGACAAGCTGTGGCTACATTATGCTGTATGTATGGCATTGTCAAGTTACAAGCACTTGTTCGTGGCAGAAGAGTCAGACAGTCTGTTGTTGGGTTTGAAATCCAAGAGAAGTGCAATCTATTGAAGTCTCCGGATGGCAAACCTGTCAAGCCAATTGCTGTACCTGCAAAAATTACAAATCTGTCAGCCAATGCTTTCATCCGAAAGCGTCTTGCTTCATCAACTACTATAATGGCCCTGCATTTGCAATATGTTCCTGGAGATCCAAATTCAGTTCTAAGCTGGTTGGAGCGCTGGTCAGCAACTAACTTTTGGAAACCAGTCCCCCAACCAAAGAAAATTCGAGACACTAAGCATCAGAGAAAGCAGGGTACTATTTCAGTGGGAGAAGCTCCATTGAGCAAGTCAAGACGTACCACCCGGAAGGTTCCTGCTGCAAGTTTTGACCCTGCCCCAGTGCAAGCAAATCCTGAACTTGAGAAGCCAAAACGAAGCTTGAGGAAAATTTCAAGCCAGCCCTCAGATACTCTGCAGGAAAACCCACAAAGTGAGCTTGAAAAGGTAAAGCGTAACTTGAGAAAGGTTCACAACCCAGTTGTTGAGAATGCTGTTGTCCCAGAAGTAGAACCCGAGGCCCCAAAGCAACATTTGGAAAAGGGGGCATTTACCCCAGTGCATGGTGTTTCGGAACAAGGGATAACTAGTTCTGATGAGAAGAATAACAAAGAACCAACTTTAACCATTTCCAATGTGCCCGATGCAGAACCTGCTACAAATTATATTAGTAAGGAGGTGTCTGATATGCCAAGCCATTATCAAGTGGTTGTGCAACCAAAGCCTTTGACCGAGATTATAAGTAAAGATGAAAACATTGCTGAAGATGAAGTGAAAACAGAGCCAAAAGATTTACCAGAGACTAGTTGCAAGGTTGAAAATTCTCACATAACAAATGGAGATTTGAGTCACAAGGAAGATCCTGTGGGAACTGAAAACCAGAAGCCGAACAGAAAGGCCTCAAATGTAGTGAAGCAAGAGCGTGCTGAGAATGGTTTACAGAACAGTCCAACTTTACCAAGTTACATGGCAGCAACTGAATCTGCCAAGGCAAAGTTGAGGGCTCAAGGATCCCCACGATTAGGACACGATGGAAGTGAGAGAAACAATGTTGCTCGGAGACATTCTCTGCCATCTTCAACTAACACCAAAATTAGCTCACAGTCACCTAGGACACAGAGACCAGTCCAATCAGGTGGCAAAGGAAGCAACAAACCTGTACCTTCTAGAGACGGCAATGGAAAGGTAATTCAAGCAGAATGGAGGAGGTGA 1740 0.4391 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNQKEGVVTSKVSETDLALDPTPNTVAKNEEELVLENDESETVLNENQEINTVGSVLQDSPPDPEKIKLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMYGIVKLQALVRGRRVRQSVVGFEIQEKCNLLKSPDGKPVKPIAVPAKITNLSANAFIRKRLASSTTIMALHLQYVPGDPNSVLSWLERWSATNFWKPVPQPKKIRDTKHQRKQGTISVGEAPLSKSRRTTRKVPAASFDPAPVQANPELEKPKRSLRKISSQPSDTLQENPQSELEKVKRNLRKVHNPVVENAVVPEVEPEAPKQHLEKGAFTPVHGVSEQGITSSDEKNNKEPTLTISNVPDAEPATNYISKEVSDMPSHYQVVVQPKPLTEIISKDENIAEDEVKTEPKDLPETSCKVENSHITNGDLSHKEDPVGTENQKPNRKASNVVKQERAENGLQNSPTLPSYMAATESAKAKLRAQGSPRLGHDGSERNNVARRHSLPSSTNTKISSQSPRTQRPVQSGGKGSNKPVPSRDGNGKVIQAEWRR* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0812 579 Pfam Protein of unknown function (DUF4005) 483 561 IPR025064 -
Amo10g0812 579 MobiDBLite consensus disorder prediction 528 560 - -
Amo10g0812 579 MobiDBLite consensus disorder prediction 348 393 - -
Amo10g0812 579 PANTHER IQ-DOMAIN 5-RELATED 1 562 - -
Amo10g0812 579 MobiDBLite consensus disorder prediction 424 579 - -
Amo10g0812 579 Gene3D - 97 146 - -
Amo10g0812 579 MobiDBLite consensus disorder prediction 424 446 - -
Amo10g0812 579 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Amo10g0812 579 MobiDBLite consensus disorder prediction 454 469 - -
Amo10g0812 579 MobiDBLite consensus disorder prediction 366 393 - -
Amo10g0812 579 SMART iq_5 98 120 IPR000048 GO:0005515
Amo10g0812 579 SMART iq_5 121 142 IPR000048 GO:0005515
Amo10g0812 579 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Amo10g0812 579 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Amo10g0812 579 MobiDBLite consensus disorder prediction 247 322 - -
Amo10g0812 579 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Amo10g0812 579 PANTHER PROTEIN IQ-DOMAIN 31 1 562 - -
Amo10g0812 579 MobiDBLite consensus disorder prediction 483 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0812 Amo-Chr10 12892386 12898123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0812 1 579 IQD Protein Family AT1G74690 44.992 5.79e-128 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0812 - - ahf:112710449 1071.23