Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0798 CCCATCTCACCTCTCTCTTCTCTCGCCACTCTGTCCCTCAAGCCCGTCGCTGGCTCCTCAAGCTTTGGTCGCCCCCTCAAGCTCGTCGCCGCCTCAAGCTCTGTTCGCCCCCTCAAGCTCGTCGCCGCCTCAAGCTCTGTTCGCCCCCTCAAGCTTGTCACGGCCTCAAGCTCTGTCGCCGCTTCAAGCTCGCCTTCCTGCTTCGGCCATCAACGCTTCCTCGGCCCTGAGTCTGGGTTTAGGGTTTTAGCTTCGGCTCGGGTCTTCCATCAACGCTTGCTTCGTCTCTCTGCCTATGTGCTGCTCTTGCTATATTCTATTATTCTATTACTTCATCATCTCTGCCAGCGCAAACTTACTTGCCGCTTTCTGCTCTGGCTCCCTTCGTCTCTGAAGCTTGCTGATTTAGACAGAGATCCATCAAGTGCTTGTGACGAAGGAGTTTACAACTGTGCTGGGTGTGCAACTCCTCTTTACAAGTCTTCCACTAAATTTGACTCTGGTTATGGTTGGCCTGCTTTCTTTGAGGGCTTACTTGGTGCCATCAATCGCTCACCAGACCCATATGGGAGGAGGACTGAGATAACTTGTGCAGCATGTGGTGGCCATTTGGGTCATGTTTTCAAGGGAGAGGGGTTCAAGACACCCACTCATGAACGCCATTGTGTTAATAGTGTTTCCGTTGATGCTGAGAGAGCCTATCACCGAAATGCCCTTGTCATTCTAGAGAAACTGTATACTGAGCTTTTTCTGCTTAACTCATCAGGTAAAAAATTCTGGAACTTGTTCCATATGCAACCTATGCGTGACCAGAAGAGAGAAGTACAGTATTTTATTGGTGTTCAACTCGACGATAGCCAACATGTGGAGCCTCTTCACAACTGCATCACAGAAAATACTGCAAAAGAAGGAGAACAACTGATCCTAGATAGTGGAGAACAGAGACCTAAGGCTACATTTATATACAGTAGCTAG 975 0.4923 PISPLSSLATLSLKPVAGSSSFGRPLKLVAASSSVRPLKLVAASSSVRPLKLVTASSSVAASSSPSCFGHQRFLGPESGFRVLASARVFHQRLLRLSAYVLLLLYSIILLLHHLCQRKLTCRFLLWLPSSLKLADLDRDPSSACDEGVYNCAGCATPLYKSSTKFDSGYGWPAFFEGLLGAINRSPDPYGRRTEITCAACGGHLGHVFKGEGFKTPTHERHCVNSVSVDAERAYHRNALVILEKLYTELFLLNSSGKKFWNLFHMQPMRDQKREVQYFIGVQLDDSQHVEPLHNCITENTAKEGEQLILDSGEQRPKATFIYSS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0798 324 Gene3D Peptide methionine sulfoxide reductase. 137 225 - -
Amo10g0798 324 Gene3D PAS domain 226 317 - -
Amo10g0798 324 Pfam SelR domain 144 229 IPR002579 GO:0033743
Amo10g0798 324 SMART pac_2 246 288 IPR001610 -
Amo10g0798 324 PANTHER - 145 230 IPR028427 GO:0006979|GO:0016671|GO:0030091
Amo10g0798 324 ProSiteProfiles PAC domain profile. 245 297 IPR000700 -
Amo10g0798 324 SUPERFAMILY Mss4-like 144 230 IPR011057 -
Amo10g0798 324 CDD PAS 232 284 IPR000014 -
Amo10g0798 324 ProSiteProfiles Methionine-R-sulfoxide reductase (MsrB) domain profile. 111 233 IPR002579 GO:0033743
Amo10g0798 324 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE B4-RELATED 145 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0798 Amo-Chr10 12533094 12537949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0798 236 308 AGC Kinase Gene Family AT3G45780 60.274 8.48e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0798 K07305 - zju:107423355 167.933