Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0739 ATGTCACCTTTCAATATCACATTTCTAGTCACAATTTTCCTCTCTCTTTTCTTCCCAACCCTTGGTAAAGTTGATCCAACATTGTCAAGGCCTAAATCCCAAACATTATCATACATAGAGTCCTCTTGCAATGGCACTCTCTACCGTGAACTATGTATCCGTTCCCTTTCGAAATTCGCCAGCACCAATGAAATCGACGGTCCACAACACTTAGCACATGTTGCCTTGTCAATTAGCCTTGCTAGGGCAATCCACACAAAGAACTTCTTGGTGGGAGTTTCCAAGGAACTCGACGCGATTAACAACCTCAACAACAATAACAATAACAATAACGACAGAAAGAAGAGAAGGGAGTACCAAACAATTCAAGATTGTGTGAATCAACTAAGTGATAGTGTTGACCAACTTAGTCAATCAATCAAGGAGCTAAGAAGGATGAACAACAAAAGTAGATCAACAATAAATGATGATTTCTTGTGGCATATTAACAATGTTGAGACATGGGTTAGCACTGCCTTAACAGATGCTAGTAGTTGTGTTTATGCATTCCCTGGCCATAGAATGAGTAAGAGAACAGCTTCAATTAGGGGTAAGGCCATGAATGTTGCACAAGTTACTAGCAATGCATTAGCCTTCATTCATAAGTACATGGAAGCAGCAACAAGGAACACCAAGCCTTGA 681 0.4023 MSPFNITFLVTIFLSLFFPTLGKVDPTLSRPKSQTLSYIESSCNGTLYRELCIRSLSKFASTNEIDGPQHLAHVALSISLARAIHTKNFLVGVSKELDAINNLNNNNNNNNDRKKRREYQTIQDCVNQLSDSVDQLSQSIKELRRMNNKSRSTINDDFLWHINNVETWVSTALTDASSCVYAFPGHRMSKRTASIRGKAMNVAQVTSNALAFIHKYMEAATRNTKP* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0739 226 Pfam Plant invertase/pectin methylesterase inhibitor 38 211 IPR006501 GO:0004857
Amo10g0739 226 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 216 IPR006501 GO:0004857
Amo10g0739 226 PANTHER BNAANNG18590D PROTEIN 8 219 - -
Amo10g0739 226 SMART PMEI_2 34 212 IPR006501 GO:0004857
Amo10g0739 226 Coils Coil 126 153 - -
Amo10g0739 226 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 216 IPR035513 -
Amo10g0739 226 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 219 - -
Amo10g0739 226 CDD PMEI-like_3 41 216 - -
Amo10g0739 226 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 216 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0739 Amo-Chr10 10885583 10886555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0739 26 212 Carbohydrate Esterase AT3G49220 25.668 3.18e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0739 - - gmx:100807870 247.284