Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0718 ATGACTTCTAAAAAGAGGAAAATAGCATGGTCAGAGAAAGAGGACAATCTGCTACGAGATGCTGTTCAAAGATTTGGTGAAGGGCATTGGGCTACCATTGCAAAAAGAGGCAACTTTTCTGTTAAGAGAACGGCTAAACAGATAAATCAATATGCAAGTGAATGTTTAATTCAGTGTAAAGCAACATGTATGTGCAGAAGAAATATGTTATTAGAGGTGGCAATGGTTGCAAGGATGCTGATGTGGGAAGATGAGTTTTGTCAAGGAAGGAGTGCAAGTCTGGTGGAAGACATGGACGGAGGAGGAGAGGATCTAGTGAGAAAGACCTTTAGCAAGATGTCCATTCAGTTATATAATTATGGAGAAGGGTGGCTTCCTCCTGAATGGACCGACCAGTTTGATTTTGGCATTCAGACTATTGATGTAATTCAAGCTAGACATGGCCTTATAAATTATAGGAACAGTAATTAA 471 0.397 MTSKKRKIAWSEKEDNLLRDAVQRFGEGHWATIAKRGNFSVKRTAKQINQYASECLIQCKATCMCRRNMLLEVAMVARMLMWEDEFCQGRSASLVEDMDGGGEDLVRKTFSKMSIQLYNYGEGWLPPEWTDQFDFGIQTIDVIQARHGLINYRNSN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0718 156 ProSiteProfiles Myb-like domain profile. 2 56 IPR001005 -
Amo10g0718 156 PANTHER GB|AAF34833.1 77 124 IPR044170 -
Amo10g0718 156 PANTHER GB|AAF34833.1 125 150 IPR044170 -
Amo10g0718 156 CDD SANT_TRF 10 48 - -
Amo10g0718 156 Gene3D - 1 68 - -
Amo10g0718 156 SMART sant 6 58 IPR001005 -
Amo10g0718 156 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 60 IPR017930 -
Amo10g0718 156 Pfam Myb-like DNA-binding domain 9 50 IPR001005 -
Amo10g0718 156 SUPERFAMILY Homeodomain-like 5 51 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0718 Amo-Chr10 9531357 9533012 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo10g0718 Myb_DNA-binding 6.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0718 - - aip:110263389 160.229