Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0700 ATGTGCGGAATCCTTGCAGTCTTGGGTTGTGTTGACAACTCTCAGGCCAAGCGCGCTCGCATCATCGAGTTATCTCGCAGATTGAAGCATAGAGGACCTGATTGGAGTGGATTGCATTGCCATGGAGATTGTTATCTTGCTCATCAAAGGCTTGCTATTGTTGACCCCACTTCAGGGGATCAACCTCTTTATAACGAAGACAAGACTGTTGTTGTCACAGTAAATGGGGAGATATATAACCATAAGGAACTGAGACAGAAATTGAGTTCCCACCAGTTTCGAACTGGAAGCGACTGTGAAGTCATTGCTCATCTTTACGAAGAGTATGGAGAAGAATTTATTGATATGCTGGATGGGATGTTCTCCTTTGTCCTTCTTGACACAAGAGATAAAAGCTTCATTGCTGCTCGCGACGCTATTGGCATTACCCCTCTTTACTTGGGATGGGGCCTTGATGGATCGACATGGTTTGCATCTGAAATGAAAGCTTTAAGTGATGATTGTGAGAGATTCATATCTTTTCCGCCAGGGCATATATATTCCAGCAAACAGGGAGGATTAAGAAGATGGTACAATCCACCATGGTTCACAGAGCAAATTCCATCAACACCCTATGATCCTCAGATCTTACGTCAAGCCTTTGAGAAGGCTGTGCTTAAGAGGTTGATGACTGATGTACCTTTTGGAGTTCTTTTGTCGGGAGGACTTGACTCATCGCTTGTTGCTGCCGTGACCAATCGTTTTGTGGCTCAATCTGCAGCTGCACAACAGTGGGGATCACAGTTGCATACTTTCTGTATTGGTTTAAAGGGCTCTCCAGATTTGAAATTTGCAAAAGAGGTAGCAGATTATCTTGGTACTCGACATTATGAACTTTATTTCACAGTTCAGGAAGGTATAGATGCACTTGAAGAAGTCATTTACCACATTGAAACATATGATGTGACAACTATCAGAGCAAGTACTCCAATGTTCCTTATGTCCAGAAAAATCAAATCCATGGGAGTGAAAATGGTTCTTTCGGGAGAAGGTTCAGATGAAATATTTGGAGGTTACCTATATTTCCATAAAGCACCTAATAAYGAAGAGTTTCATGAAGAAACATGTCGAAAAATCAAAGCTCTTCATCTTTATGACTGCCTGAGAGCCAATAAATCAACTTCAGCATGGGGTATAGAGGCACGTGTACCATTCTTGGATAAAGAATTTATCAACACAGCCATGAGTATTGATCCAGAGTGGAAAATGATACGACCTGATCTCGGAAGGATAGAGAAGTGGGTATTGCYCAATGCATTTGATGACGAAACAAATCCATATTTACCAAAGCACATTTTGTACAGGCAGAAGGAACAGTTKAGRGAMGGTGTAGGGTACAGCTGGATTGATGGCTTGAAGGAGCATGCTAACCAACAAGTCACAGATGGAATGCTGTTGCATGCTAACTATGTTTACCCTGAAAACACTCCCACAACAAAAGAAGCATACCTCTACAGGACAATTTTTGAGAAGCACTTTCCAAAGAATGCTGCAAGGTCAACCGTTCCAGGAGGTCCTAGTGTAGCGTGCAGCACCGCAAAAGCTGTGGAATGGGATGCCGAATGGTCAAAGAATCCTGACCCTTCCGGCCGTGCTGCTCTTGGTGTTCATGCAGCGGCATATGAGGCTGCAGCAGATGCAAAAACAGCCTAG 1692 0.4314 MCGILAVLGCVDNSQAKRARIIELSRRLKHRGPDWSGLHCHGDCYLAHQRLAIVDPTSGDQPLYNEDKTVVVTVNGEIYNHKELRQKLSSHQFRTGSDCEVIAHLYEEYGEEFIDMLDGMFSFVLLDTRDKSFIAARDAIGITPLYLGWGLDGSTWFASEMKALSDDCERFISFPPGHIYSSKQGGLRRWYNPPWFTEQIPSTPYDPQILRQAFEKAVLKRLMTDVPFGVLLSGGLDSSLVAAVTNRFVAQSAAAQQWGSQLHTFCIGLKGSPDLKFAKEVADYLGTRHYELYFTVQEGIDALEEVIYHIETYDVTTIRASTPMFLMSRKIKSMGVKMVLSGEGSDEIFGGYLYFHKAPNNEEFHEETCRKIKALHLYDCLRANKSTSAWGIEARVPFLDKEFINTAMSIDPEWKMIRPDLGRIEKWVLXNAFDDETNPYLPKHILYRQKEQXRXGVGYSWIDGLKEHANQQVTDGMLLHANYVYPENTPTTKEAYLYRTIFEKHFPKNAARSTVPGGPSVACSTAKAVEWDAEWSKNPDPSGRAALGVHAAAYEAAADAKTA* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0700 563 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 195 IPR029055 -
Amo10g0700 563 Pfam Asparagine synthase 210 362 IPR001962 GO:0004066|GO:0006529
Amo10g0700 563 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 185 IPR017932 -
Amo10g0700 563 Gene3D HUPs 195 514 IPR014729 -
Amo10g0700 563 PANTHER ASPARAGINE SYNTHETASE 1 557 - -
Amo10g0700 563 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 192 IPR029055 -
Amo10g0700 563 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 200 485 - -
Amo10g0700 563 CDD Asn_Synthase_B_C 211 456 IPR001962 GO:0004066|GO:0006529
Amo10g0700 563 PIRSF Asn_synthetase_glu-h 1 360 IPR006426 GO:0004066|GO:0006529
Amo10g0700 563 PIRSF Asn_synthetase_glu-h 357 518 IPR006426 GO:0004066|GO:0006529
Amo10g0700 563 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 3 1 557 - -
Amo10g0700 563 CDD AsnB 2 192 IPR033738 -
Amo10g0700 563 Pfam Glutamine amidotransferase domain 48 165 IPR017932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0700 Amo-Chr10 8932498 8938365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0700 2 164 PRT Gene Family AT4G34740 27.751 2.26e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0700 K01953 - gmx:732660 1022.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1139 20 21770844 21775630 Amo10g0700 10 8932498 8938365 hybridization